Strain Fitness in Pseudomonas putida KT2440 around PP_4163

Experiment: P. putida PUT 7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. putida PUT 7 MOI 1
4,705,906	-		PP_4162	0.44	-0.8
4,706,077	-		PP_4162	0.61	-2.5
4,706,092	+		PP_4162	0.62	+0.9
4,706,092	+		PP_4162	0.62	+2.8
4,706,092	+		PP_4162	0.62	+0.7
4,706,092	+		PP_4162	0.62	+0.0
4,706,093	-		PP_4162	0.62	+1.2
4,706,225	-		PP_4162	0.75	+0.0
4,706,672	+		PP_4163	0.21	-2.3
4,706,706	+		PP_4163	0.25	-1.7
4,706,747	-		PP_4163	0.31	-0.7
4,706,809	-		PP_4163	0.38	-0.2
4,706,809	-		PP_4163	0.38	-1.1
4,706,839	-		PP_4163	0.42	-2.8
4,706,839	-		PP_4163	0.42	-3.3
4,707,009	-		PP_4163	0.64	-0.3
4,707,050	-		PP_4163	0.69	-0.3
4,707,069	+		PP_4163	0.71	-0.8
4,707,434	+				-2.7
4,707,434	+				-2.6
4,707,601	+		PP_4164	0.23	-0.1
4,707,601	+		PP_4164	0.23	-2.0
4,707,602	-		PP_4164	0.23	+0.1
4,707,602	-		PP_4164	0.23	-2.2
4,707,673	+		PP_4164	0.31	-0.1
4,707,674	-		PP_4164	0.31	-2.2
4,707,785	-		PP_4164	0.44	+1.0
4,708,024	+		PP_4164	0.72	+0.4
4,708,025	-		PP_4164	0.72	-0.7
4,708,069	+		PP_4164	0.77	-1.1
4,708,104	+		PP_4164	0.81	-0.3
4,708,104	+		PP_4164	0.81	+1.2
4,708,105	-		PP_4164	0.82	-2.5
4,708,105	-		PP_4164	0.82	-2.4
4,708,220	+				-0.2