Strain Fitness in Pseudomonas putida KT2440 around PP_2773

Experiment: P. putida PUT 7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. putida PUT 7 MOI 1
3,156,621	-		PP_2772	0.29	-1.0
3,156,635	+		PP_2772	0.31	-1.9
3,156,636	-		PP_2772	0.31	-1.7
3,156,636	-		PP_2772	0.31	+0.0
3,156,636	-		PP_2772	0.31	-2.4
3,156,636	-		PP_2772	0.31	-2.0
3,156,733	-		PP_2772	0.39	+0.6
3,157,066	+		PP_2772	0.67	+2.4
3,157,067	-		PP_2772	0.67	-3.1
3,157,171	+		PP_2772	0.76	-1.7
3,157,536	+		PP_2773	0.14	+0.6
3,157,537	-		PP_2773	0.14	+2.9
3,157,730	-				-1.8
3,157,732	-				-2.6
3,157,732	-				-1.2
3,157,732	-				-0.2
3,157,732	-				+3.0
3,157,993	+				+1.0
3,157,994	-				+0.8
3,157,994	-				-1.6
3,157,998	-				-3.2
3,158,077	+				-2.4
3,158,111	+				-1.4
3,158,198	-		PP_2774	0.10	-2.1
3,158,308	+		PP_2774	0.16	+0.4