Strain Fitness in Pseudomonas putida KT2440 around PP_2765

Experiment: P. putida PUT 7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. putida PUT 7 MOI 1
3,147,822	+				-2.2
3,147,836	-				-0.6
3,148,221	+		PP_2764	0.22	-3.3
3,148,222	-		PP_2764	0.23	-0.4
3,148,474	+		PP_2764	0.58	-3.0
3,148,636	+		PP_2764	0.81	-1.5
3,148,830	-				+0.2
3,148,890	+				-0.4
3,149,301	+		PP_2765	0.46	-2.5
3,149,403	+		PP_2765	0.56	-0.4
3,149,715	-		PP_2765	0.84	-1.2
3,149,811	+				-1.0
3,150,692	+		PP_2766	0.70	-2.2
3,150,692	+		PP_2766	0.70	-0.7
3,150,692	+		PP_2766	0.70	+0.4
3,150,693	-		PP_2766	0.70	+1.0
3,150,693	-		PP_2766	0.70	-2.4
3,150,704	+		PP_2766	0.71	+1.5
3,150,704	+		PP_2766	0.71	+0.5
3,150,704	+		PP_2766	0.71	+1.8
3,150,705	-		PP_2766	0.71	+1.4
3,150,726	+		PP_2766	0.73	+0.7