Strain Fitness in Pseudomonas putida KT2440 around PP_t37

Experiment: P. putida PUT10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. putida PUT10 MOI 1
2,585,842	+				+2.6
2,585,863	+				+2.7
2,585,863	+				+3.0
2,585,863	+				+2.1
2,586,362	+				-0.5
2,586,362	+				-1.2
2,586,363	-				-0.7
2,586,393	-				-1.0
2,586,421	+				-0.5
2,586,425	+				-0.5
2,586,425	+				-0.1
2,586,425	+				+0.1
2,586,425	+				-1.1
2,586,425	+				+0.8
2,586,426	-				-1.7
2,586,426	-				+0.3
2,586,594	+				+1.1
2,586,594	+				-0.7
2,586,594	+				+0.5
2,586,595	-				+0.4
2,586,595	-				+0.0
2,586,604	+				+0.3
2,586,608	+				-0.3
2,586,609	-				+0.2
2,586,618	+				-0.2
2,586,618	+				+0.8
2,586,618	+				+0.2
2,586,619	-				+0.3
2,586,619	-				+0.6
2,586,621	+				-1.1
2,586,635	+				+1.0
2,586,641	+				-0.2
2,586,641	+				+0.5
2,586,642	-				-1.0
2,586,647	+				+0.7
2,586,647	+				-1.8
2,586,648	-				-0.8
2,586,648	-				+0.0
2,586,658	+				-0.7
2,586,659	-				+0.1
2,586,755	-				-1.1
2,586,755	-				-0.3