Strain Fitness in Pseudomonas putida KT2440 around PP_4784

Experiment: P. putida PUT10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. putida PUT10 MOI 1
5,445,610	-		PP_4782	0.71	+0.6
5,445,663	+		PP_4782	0.77	+0.3
5,445,663	+		PP_4782	0.77	-2.3
5,445,663	+		PP_4782	0.77	-1.4
5,445,664	-		PP_4782	0.78	+1.3
5,445,756	+		PP_4782	0.89	-0.7
5,445,756	+		PP_4782	0.89	+0.4
5,445,804	+				-0.2
5,445,804	+				-0.0
5,445,843	+				-0.5
5,445,874	+				-1.0
5,446,222	+		PP_4783	0.59	-1.3
5,446,489	+				+0.7
5,447,821	+				-0.6
5,447,822	-				+1.3
5,447,822	-				+0.4
5,447,848	+				-0.6
5,447,848	+				+0.2
5,447,849	-				+0.6
5,447,887	+				-0.7
5,447,887	+				-0.7
5,447,888	-				+0.6
5,447,892	-				+0.2
5,447,892	-				+0.1
5,447,948	+				+0.3
5,447,949	-				-2.7
5,447,949	-				+1.5
5,447,949	-				+0.6
5,447,965	-				-0.7
5,447,972	-				+0.7
5,447,972	-				+1.6
5,448,011	+				-2.4
5,448,234	+		PP_4785	0.38	-1.4
5,448,234	+		PP_4785	0.38	-0.3
5,448,235	-		PP_4785	0.39	+0.7
5,448,235	-		PP_4785	0.39	+1.2
5,448,237	+		PP_4785	0.39	+2.5
5,448,237	+		PP_4785	0.39	+0.1
5,448,238	-		PP_4785	0.39	-0.4
5,448,238	-		PP_4785	0.39	+0.1
5,448,238	-		PP_4785	0.39	+0.2
5,448,238	-		PP_4785	0.39	-0.1
5,448,238	-		PP_4785	0.39	+2.2
5,448,238	-		PP_4785	0.39	+1.9
5,448,240	+		PP_4785	0.40	-0.8
5,448,240	+		PP_4785	0.40	+1.2
5,448,241	-		PP_4785	0.40	-2.9
5,448,382	-		PP_4785	0.66	-2.3
5,448,382	-		PP_4785	0.66	+0.3
5,448,513	+		PP_4785	0.90	-0.2
5,448,514	-		PP_4785	0.90	+0.6
5,448,679	-		PP_4786	0.32	+0.1