Strain Fitness in Pseudomonas putida KT2440 around PP_4712

Experiment: P. putida PUT10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. putida PUT10 MOI 1
5,355,237	-		PP_4710	0.49	+2.5
5,355,240	-		PP_4710	0.50	+2.9
5,355,240	-		PP_4710	0.50	+3.7
5,355,240	-		PP_4710	0.50	+3.1
5,355,240	-		PP_4710	0.50	+3.4
5,355,267	+		PP_4710	0.53	+0.7
5,355,267	+		PP_4710	0.53	-0.3
5,355,325	+		PP_4710	0.59	+2.4
5,355,325	+		PP_4710	0.59	+2.4
5,355,325	+		PP_4710	0.59	+2.0
5,355,325	+		PP_4710	0.59	+2.7
5,355,325	+		PP_4710	0.59	+2.2
5,355,326	-		PP_4710	0.59	+3.5
5,355,329	+		PP_4710	0.59	+1.8
5,355,329	+		PP_4710	0.59	+2.1
5,355,329	+		PP_4710	0.59	+1.1
5,355,329	+		PP_4710	0.59	+2.2
5,355,330	-		PP_4710	0.59	+2.9
5,355,337	-		PP_4710	0.60	+4.8
5,355,337	-		PP_4710	0.60	+3.2
5,355,446	+		PP_4710	0.72	+2.6
5,355,447	-		PP_4710	0.72	+2.8
5,355,499	+		PP_4710	0.78	+3.0
5,355,499	+		PP_4710	0.78	+2.6
5,355,500	-		PP_4710	0.78	+3.5
5,355,684	-				+3.2
5,355,707	-				+2.8
5,355,707	-				+3.4
5,355,996	-				+1.7
5,356,090	+				+0.5
5,356,091	-				+0.6
5,356,091	-				+0.8
5,356,117	-				-0.3
5,356,117	-				-0.3
5,356,194	-				-3.0
5,356,194	-				-2.0
5,356,229	-				+1.7
5,358,786	-				-4.3