Strain Fitness in Pseudomonas putida KT2440 around PP_0069

Experiment: P. putida PUT10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. putida PUT10 MOI 1
79,040	-				-1.6
79,040	-				-1.4
79,086	-				-1.0
79,086	-				-0.1
79,086	-				-2.6
79,128	-				-0.5
79,128	-				-0.5
79,137	-				-0.7
79,137	-				+0.1
79,148	-				-1.9
79,182	-				-0.1
79,213	+				-3.3
79,214	-				+1.0
79,214	-				+0.8
79,214	-				-0.9
79,214	-				-0.5
79,298	+				-1.4
79,298	+				+0.9
79,298	+				-0.7
79,298	+				-3.1
79,454	+		PP_0069	0.19	-0.8
79,455	-		PP_0069	0.19	+0.2
79,476	+		PP_0069	0.21	-0.7
79,477	-		PP_0069	0.21	-3.1
79,477	-		PP_0069	0.21	-0.9
79,477	-		PP_0069	0.21	-1.2
79,477	-		PP_0069	0.21	-0.8
79,707	+		PP_0069	0.42	-0.4
79,708	-		PP_0069	0.42	-2.3
79,724	+		PP_0069	0.44	-1.6
80,029	+		PP_0069	0.71	-0.4
80,029	+		PP_0069	0.71	+0.0
80,029	+		PP_0069	0.71	-0.1
80,030	-		PP_0069	0.71	-0.9
80,341	+				-0.6
80,341	+				-0.1
80,345	+				-0.1
80,345	+				-4.5
80,346	-				-1.5
80,346	-				-0.8
80,346	-				-1.7
80,365	+				-0.2
80,944	+				+0.2
80,944	+				-1.6
80,944	+				+0.2
80,944	+				+0.3
80,944	+				-0.1
80,945	-				+0.0
80,945	-				-0.6
81,007	+				-0.2
81,007	+				+0.1
81,007	+				+1.6
81,116	+		PP_5425	0.19	-0.3
81,116	+		PP_5425	0.19	-0.9
81,116	+		PP_5425	0.19	-0.6
81,117	-		PP_5425	0.20	-0.7
81,183	-		PP_5425	0.53	-1.0
81,183	-		PP_5425	0.53	-0.9
81,205	+		PP_5425	0.64	+0.2
81,206	-		PP_5425	0.64	+0.0
81,206	-		PP_5425	0.64	-0.3
81,244	-		PP_5425	0.83	+0.2
81,244	-		PP_5425	0.83	-0.5
81,270	+				+1.0
81,271	-				-0.5
81,318	+				-0.2
81,334	+				+0.4
81,334	+				-0.1