Strain Fitness in Escherichia coli BW25113 around b4650

Experiment: carbon source D-Mannose 0.5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	carbon source D-Mannose 0.5mM
3,765,663	+	yibJ	b3595	0.44	+1.0
3,765,666	+	yibJ	b3595	0.45	+1.0
3,765,673	+	yibJ	b3595	0.45	-0.2
3,765,694	+	yibJ	b3595	0.48	-4.0
3,765,722	+	yibJ	b3595	0.51	-3.0
3,765,722	+	yibJ	b3595	0.51	-1.5
3,765,725	-	yibJ	b3595	0.51	+3.3
3,765,728	+	yibJ	b3595	0.51	+0.3
3,765,732	+	yibJ	b3595	0.52	-0.3
3,765,732	+	yibJ	b3595	0.52	-4.6
3,765,732	+	yibJ	b3595	0.52	+0.0
3,765,738	+	yibJ	b3595	0.52	+1.2
3,765,738	-	yibJ	b3595	0.52	-0.9
3,765,740	-	yibJ	b3595	0.52	-0.1
3,765,742	+	yibJ	b3595	0.53	+2.4
3,765,742	+	yibJ	b3595	0.53	+2.7
3,765,742	+	yibJ	b3595	0.53	-0.6
3,765,742	+	yibJ	b3595	0.53	+0.5
3,765,753	+	yibJ	b3595	0.54	+1.5
3,765,753	+	yibJ	b3595	0.54	-4.3
3,765,753	+	yibJ	b3595	0.54	-0.5
3,765,778	+	yibJ	b3595	0.57	-2.0
3,765,778	+	yibJ	b3595	0.57	+2.6
3,765,784	+	yibJ	b3595	0.57	+1.1
3,765,786	-	yibJ	b3595	0.57	-0.6
3,765,788	+	yibJ	b3595	0.58	-0.9
3,765,789	+	yibJ	b3595	0.58	-0.8
3,765,794	-	yibJ	b3595	0.58	-1.0
3,765,794	-	yibJ	b3595	0.58	-1.8
3,765,795	+	yibJ	b3595	0.58	+2.2
3,765,795	+	yibJ	b3595	0.58	-1.2
3,765,795	+	yibJ	b3595	0.58	-0.5
3,765,800	+	yibJ	b3595	0.59	+1.7
3,765,800	+	yibJ	b3595	0.59	+1.4
3,765,800	+	yibJ	b3595	0.59	+3.2
3,765,800	+	yibJ	b3595	0.59	+0.9
3,765,800	+	yibJ	b3595	0.59	-0.7
3,765,800	+	yibJ	b3595	0.59	-0.5
3,765,800	+	yibJ	b3595	0.59	+3.1
3,765,800	+	yibJ	b3595	0.59	-1.4
3,765,800	+	yibJ	b3595	0.59	-0.5
3,765,808	-	yibJ	b3595	0.60	+3.6
3,765,808	-	yibJ	b3595	0.60	-0.6
3,765,810	-	yibJ	b3595	0.60	+1.4
3,765,811	-	yibJ	b3595	0.60	+1.2
3,765,824	+	yibJ	b3595	0.61	+0.7
3,765,824	+	yibJ	b3595	0.61	-1.0
3,765,824	+	yibJ	b3595	0.61	-1.5
3,765,824	+	yibJ	b3595	0.61	-0.6
3,765,824	+	yibJ	b3595	0.61	+1.5
3,765,824	+	yibJ	b3595	0.61	+1.0
3,765,825	+	yibJ	b3595	0.61	+0.9
3,765,826	+	yibJ	b3595	0.62	+2.7
3,765,826	+	yibJ	b3595	0.62	-1.0
3,765,826	+	yibJ	b3595	0.62	+0.4
3,765,832	-	yibJ	b3595	0.62	+3.2
3,765,832	-	yibJ	b3595	0.62	+1.2
3,765,832	-	yibJ	b3595	0.62	+0.0
3,765,832	-	yibJ	b3595	0.62	+0.6
3,765,832	-	yibJ	b3595	0.62	+1.2
3,765,833	-	yibJ	b3595	0.62	+1.2
3,765,833	-	yibJ	b3595	0.62	+0.9
3,765,833	-	yibJ	b3595	0.62	-0.3
3,765,841	+	yibJ	b3595	0.63	+0.6
3,765,841	+	yibJ	b3595	0.63	-3.0
3,765,843	-	yibJ	b3595	0.63	-1.2
3,765,985	-	yibJ	b3595	0.78	+0.4
3,765,994	-	yibJ	b3595	0.79	+1.6
3,765,994	-	yibJ	b3595	0.79	+3.2
3,765,994	-	yibJ	b3595	0.79	+0.4
3,765,996	-	yibJ	b3595	0.80	+1.2
3,766,001	-	yibJ	b3595	0.80	+3.2
3,766,117	+				+3.2
3,766,691	+	yibS	b4650	0.12	+3.2
3,766,713	-	yibS	b4650	0.20	+3.2
3,766,715	+	yibS	b4650	0.21	+3.2
3,766,715	+	yibS	b4650	0.21	+3.2
3,766,754	-	yibS	b4650	0.37	-1.7
3,766,757	+	yibS	b4650	0.38	+0.9
3,766,773	-	yibS	b4650	0.44	+3.2
3,766,780	+	yibS	b4650	0.47	+3.2
3,766,780	+	yibS	b4650	0.47	+3.2
3,766,840	+	yibS	b4650	0.71	-1.6
3,766,840	+	yibS	b4650	0.71	+0.9
3,766,840	+	yibS	b4650	0.71	-1.1
3,766,840	+	yibS	b4650	0.71	+0.0
3,766,841	+	yibS	b4650	0.71	-3.0
3,766,856	+	yibS	b4650	0.77	-1.2
3,766,858	+	yibS	b4650	0.78	-0.5
3,766,858	+	yibS	b4650	0.78	-0.5
3,766,858	+	yibS	b4650	0.78	+0.2
3,766,859	+	yibS	b4650	0.78	-1.2
3,766,878	+	yibS	b4650	0.86	-0.1
3,766,878	+	yibS	b4650	0.86	-0.7
3,766,892	+				-1.0
3,766,900	+				-2.3
3,766,903	+				+3.4
3,766,903	+				+3.2
3,766,932	+	yibW	b4651	0.20	+1.2
3,766,935	+	yibW	b4651	0.24	+3.2