Strain Fitness in Escherichia coli BW25113 around b2008

Experiment: carbon source D-Mannose 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	carbon source D-Mannose 1mM
2,076,611	+	yoeD	b4642	0.29	-5.5
2,076,670	-	yoeD	b4642	0.75	-2.7
2,076,697	+				+0.3
2,076,881	-	yoeF	b4538	0.60	+2.4
2,076,886	-	yoeF	b4538	0.62	+1.0
2,076,972	+				+0.4
2,076,973	-				+1.5
2,076,988	+				+0.2
2,077,046	-				-2.7
2,077,046	-				+0.7
2,077,120	+	yeeX	b2007	0.19	+1.3
2,077,167	+	yeeX	b2007	0.34	+0.6
2,077,185	-	yeeX	b2007	0.39	-0.2
2,077,364	-				-2.6
2,077,364	-				-4.5
2,077,393	-				-0.4
2,077,426	-				+0.4
2,077,541	+				+1.9
2,077,541	+				+0.6
2,077,615	+				-1.9
2,077,750	+	yeeA	b2008	0.18	-0.3
2,077,753	-	yeeA	b2008	0.19	-0.1
2,077,758	-	yeeA	b2008	0.19	+0.6
2,077,800	-	yeeA	b2008	0.23	+1.0
2,077,858	-	yeeA	b2008	0.28	-0.3
2,077,895	+	yeeA	b2008	0.32	+3.2
2,077,895	+	yeeA	b2008	0.32	-3.7
2,078,047	-	yeeA	b2008	0.46	-1.8
2,078,068	+	yeeA	b2008	0.48	+2.2
2,078,115	-	yeeA	b2008	0.53	-0.0
2,078,611	-				-0.8
2,078,684	-				-0.2
2,078,689	-				-3.1
2,078,853	+				-2.7
2,078,861	-	sbmC	b2009	0.10	+1.6
2,078,864	+	sbmC	b2009	0.11	+1.2
2,079,000	+	sbmC	b2009	0.39	-0.5
2,079,077	+	sbmC	b2009	0.56	+0.9
2,079,281	+				+0.1
2,079,472	-				+1.1
2,079,472	-				-1.2
2,079,505	-				-0.4
2,079,568	-	dacD	b2010	0.14	-0.0
2,079,612	+	dacD	b2010	0.18	-0.1