Strain Fitness in Pseudomonas putida KT2440 around PP_5306

Experiment: P. putida South MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. putida South MOI 1
6,052,659	-				+1.0
6,052,660	+				-1.5
6,052,660	+				+0.4
6,052,660	+				+0.6
6,052,661	-				+0.1
6,052,661	-				-0.1
6,052,710	+		PP_5305	0.12	+0.6
6,052,760	+		PP_5305	0.18	-1.8
6,052,760	+		PP_5305	0.18	+0.1
6,052,760	+		PP_5305	0.18	+2.3
6,052,761	-		PP_5305	0.18	+0.4
6,052,761	-		PP_5305	0.18	-0.2
6,052,820	+		PP_5305	0.25	+0.1
6,052,820	+		PP_5305	0.25	-0.4
6,052,820	+		PP_5305	0.25	-0.6
6,052,821	-		PP_5305	0.25	-0.2
6,052,821	-		PP_5305	0.25	-0.2
6,052,821	-		PP_5305	0.25	-0.5
6,052,821	-		PP_5305	0.25	+0.1
6,052,821	-		PP_5305	0.25	+1.4
6,052,911	-		PP_5305	0.35	-0.3
6,052,911	-		PP_5305	0.35	-2.0
6,052,982	+		PP_5305	0.43	+1.0
6,052,982	+		PP_5305	0.43	+0.4
6,052,982	+		PP_5305	0.43	-0.9
6,052,982	+		PP_5305	0.43	+0.9
6,052,982	+		PP_5305	0.43	+0.4
6,052,983	-		PP_5305	0.44	-1.7
6,052,983	-		PP_5305	0.44	+0.9
6,052,983	-		PP_5305	0.44	+0.7
6,052,986	+		PP_5305	0.44	-0.1
6,052,987	-		PP_5305	0.44	-0.1
6,052,987	-		PP_5305	0.44	-0.2
6,053,066	+		PP_5305	0.53	-1.5
6,053,123	+		PP_5305	0.60	+0.8
6,053,123	+		PP_5305	0.60	-0.1
6,053,213	+				+0.3
6,053,213	+		PP_5305	0.70	+0.7
6,053,213	+		PP_5305	0.70	-0.3
6,053,214	-		PP_5305	0.71	-0.1
6,053,214	-		PP_5305	0.71	-0.2
6,053,214	-		PP_5305	0.71	-0.3
6,053,214	-		PP_5305	0.71	+0.0
6,053,262	-		PP_5305	0.76	+0.1
6,053,270	+		PP_5305	0.77	-0.0
6,053,270	+		PP_5305	0.77	+0.2
6,053,271	-		PP_5305	0.77	+0.2
6,053,471	-				+0.0
6,053,528	+				-1.6
6,053,542	+				+0.2
6,055,078	+				-0.6