Strain Fitness in Pseudomonas putida KT2440 around PP_2301

Experiment: P. putida South MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. putida South MOI 1
2,628,214	+				+1.0
2,628,302	+				-0.3
2,628,302	+				-0.7
2,628,317	+				-1.5
2,629,368	+				+1.4
2,629,369	-		PP_2301	0.24	+4.7
2,629,605	+		PP_2301	0.42	+0.4
2,630,244	+				+1.4
2,630,244	+				+1.7
2,630,244	+				+2.4
2,630,244	+				+1.4
2,630,453	-				+0.7
2,630,477	+				+0.5
2,630,477	+				+0.6
2,630,477	+				+0.7
2,630,477	+				-0.8
2,630,478	-				+2.7
2,630,675	+				+0.4
2,630,675	+				+1.1
2,630,676	-				+1.1
2,630,676	-				+2.0
2,630,676	-				+0.7
2,630,945	-		PP_2302	0.17	+0.2
2,630,945	-		PP_2302	0.17	+0.7