Strain Fitness in Pseudomonas putida KT2440 around PP_2300

Experiment: P. putida South MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. putida South MOI 1
2,627,541	+		PP_2299	0.47	-1.4
2,627,541	+		PP_2299	0.47	-1.6
2,627,664	+		PP_2299	0.56	-1.2
2,627,664	+		PP_2299	0.56	-3.2
2,627,665	-		PP_2299	0.56	-2.5
2,628,214	+				+1.0
2,628,302	+				-0.3
2,628,302	+				-0.7
2,628,317	+				-1.5
2,629,368	+				+1.4
2,629,369	-		PP_2301	0.24	+4.7
2,629,605	+		PP_2301	0.42	+0.4