Strain Fitness in Escherichia coli BW25113 around b2168

Experiment: carbon source D-Glucose 0.25mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntfruA and fruK are separated by 16 nucleotidesfruK and fruB overlap by 1 nucleotides b2167: fruA - fused fructose-specific PTS enzymes: IIBcomponent/IIC components (NCBI), at 2,257,741 to 2,259,432 fruA b2168: fruK - 1-phosphofructokinase (NCBI), at 2,259,449 to 2,260,387 fruK b2169: fruB - fused fructose-specific PTS enzymes: IIA component/HPr component (NCBI), at 2,260,387 to 2,261,517 fruB Position (kb) 2259 2260 2261Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 2258.450 kb on + strand, within fruAat 2258.529 kb on - strand, within fruAat 2258.529 kb on - strand, within fruAat 2258.661 kb on + strand, within fruAat 2258.756 kb on - strand, within fruAat 2258.760 kb on - strand, within fruAat 2258.845 kb on - strand, within fruAat 2258.893 kb on - strand, within fruAat 2258.970 kb on + strand, within fruAat 2259.012 kb on + strand, within fruAat 2259.089 kb on - strand, within fruAat 2259.089 kb on - strand, within fruAat 2259.094 kb on - strand, within fruAat 2259.106 kb on + strand, within fruAat 2259.184 kb on + strand, within fruAat 2259.184 kb on + strand, within fruAat 2259.197 kb on + strand, within fruAat 2259.215 kb on - strand, within fruAat 2259.380 kb on + strandat 2259.507 kb on + strandat 2259.951 kb on - strand, within fruKat 2260.134 kb on + strand, within fruKat 2260.153 kb on + strand, within fruKat 2260.398 kb on + strandat 2260.398 kb on + strandat 2260.412 kb on - strandat 2260.416 kb on - strandat 2260.592 kb on + strand, within fruBat 2260.635 kb on - strand, within fruBat 2260.821 kb on - strand, within fruBat 2260.911 kb on + strand, within fruBat 2260.911 kb on + strand, within fruBat 2260.938 kb on + strand, within fruBat 2261.006 kb on - strand, within fruBat 2261.202 kb on + strand, within fruBat 2261.241 kb on + strand, within fruBat 2261.241 kb on + strand, within fruBat 2261.255 kb on + strand, within fruBat 2261.330 kb on - strand, within fruB

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Per-strain Table

Position Strand Gene LocusTag Fraction carbon source D-Glucose 0.25mM
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2,258,450 + fruA b2167 0.42 -1.0
2,258,529 - fruA b2167 0.47 -3.4
2,258,529 - fruA b2167 0.47 +0.3
2,258,661 + fruA b2167 0.54 -0.1
2,258,756 - fruA b2167 0.60 +0.2
2,258,760 - fruA b2167 0.60 +0.4
2,258,845 - fruA b2167 0.65 +2.0
2,258,893 - fruA b2167 0.68 +0.9
2,258,970 + fruA b2167 0.73 -5.0
2,259,012 + fruA b2167 0.75 +1.2
2,259,089 - fruA b2167 0.80 -3.2
2,259,089 - fruA b2167 0.80 -3.5
2,259,094 - fruA b2167 0.80 -0.1
2,259,106 + fruA b2167 0.81 -1.3
2,259,184 + fruA b2167 0.85 +1.7
2,259,184 + fruA b2167 0.85 +3.3
2,259,197 + fruA b2167 0.86 +1.9
2,259,215 - fruA b2167 0.87 -0.3
2,259,380 + +0.5
2,259,507 + -2.8
2,259,951 - fruK b2168 0.53 -2.7
2,260,134 + fruK b2168 0.73 -0.3
2,260,153 + fruK b2168 0.75 +1.1
2,260,398 + -0.2
2,260,398 + -1.0
2,260,412 - +1.9
2,260,416 - -1.0
2,260,592 + fruB b2169 0.18 +0.7
2,260,635 - fruB b2169 0.22 +0.9
2,260,821 - fruB b2169 0.38 -1.2
2,260,911 + fruB b2169 0.46 -0.1
2,260,911 + fruB b2169 0.46 -3.4
2,260,938 + fruB b2169 0.49 -0.9
2,261,006 - fruB b2169 0.55 +1.2
2,261,202 + fruB b2169 0.72 +1.8
2,261,241 + fruB b2169 0.76 -3.0
2,261,241 + fruB b2169 0.76 -3.0
2,261,255 + fruB b2169 0.77 +0.6
2,261,330 - fruB b2169 0.83 +1.0

Or see this region's nucleotide sequence