Strain Fitness in Escherichia coli BW25113 around b1468

Experiment: carbon source D-Glucose 0.5mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntnarY and narZ overlap by 4 nucleotidesnarZ and narU are separated by 81 nucleotides b1467: narY - nitrate reductase 2 (NRZ), beta subunit (NCBI), at 1,535,333 to 1,536,877 narY b1468: narZ - nitrate reductase 2 (NRZ), alpha subunit (NCBI), at 1,536,874 to 1,540,614 narZ b1469: narU - nitrate/nitrite transporter (NCBI), at 1,540,696 to 1,542,084 narU Position (kb) 1536 1537 1538 1539 1540 1541Strain fitness (log2 ratio) -1 0 1 2at 1535.885 kb on + strand, within narYat 1536.005 kb on - strand, within narYat 1536.005 kb on - strand, within narYat 1536.015 kb on - strand, within narYat 1536.054 kb on + strand, within narYat 1536.316 kb on - strand, within narYat 1536.316 kb on - strand, within narYat 1536.323 kb on + strand, within narYat 1536.895 kb on - strandat 1537.060 kb on - strandat 1537.542 kb on - strand, within narZat 1537.763 kb on - strand, within narZat 1537.763 kb on - strand, within narZat 1537.800 kb on - strand, within narZat 1537.939 kb on + strand, within narZat 1537.939 kb on + strand, within narZat 1538.008 kb on - strand, within narZat 1538.036 kb on - strand, within narZat 1538.036 kb on - strand, within narZat 1538.102 kb on + strand, within narZat 1538.262 kb on - strand, within narZat 1538.954 kb on - strand, within narZat 1539.103 kb on - strand, within narZat 1539.113 kb on + strand, within narZat 1539.481 kb on - strand, within narZat 1539.813 kb on + strand, within narZat 1539.875 kb on + strand, within narZat 1539.875 kb on + strand, within narZat 1539.884 kb on - strand, within narZat 1540.463 kb on - strandat 1540.622 kb on + strandat 1540.622 kb on + strandat 1540.720 kb on + strandat 1540.790 kb on + strandat 1540.922 kb on + strand, within narUat 1540.922 kb on + strand, within narUat 1541.002 kb on - strand, within narUat 1541.375 kb on - strand, within narUat 1541.375 kb on - strand, within narUat 1541.535 kb on + strand, within narUat 1541.599 kb on + strand, within narU

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Per-strain Table

Position Strand Gene LocusTag Fraction carbon source D-Glucose 0.5mM
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1,535,885 + narY b1467 0.36 -0.2
1,536,005 - narY b1467 0.43 -0.6
1,536,005 - narY b1467 0.43 +0.1
1,536,015 - narY b1467 0.44 -0.2
1,536,054 + narY b1467 0.47 +0.6
1,536,316 - narY b1467 0.64 -0.0
1,536,316 - narY b1467 0.64 +0.0
1,536,323 + narY b1467 0.64 -0.0
1,536,895 - +0.1
1,537,060 - -0.4
1,537,542 - narZ b1468 0.18 +1.0
1,537,763 - narZ b1468 0.24 +1.9
1,537,763 - narZ b1468 0.24 -0.3
1,537,800 - narZ b1468 0.25 +0.3
1,537,939 + narZ b1468 0.28 +0.5
1,537,939 + narZ b1468 0.28 -0.1
1,538,008 - narZ b1468 0.30 +0.4
1,538,036 - narZ b1468 0.31 +0.7
1,538,036 - narZ b1468 0.31 +0.7
1,538,102 + narZ b1468 0.33 +0.0
1,538,262 - narZ b1468 0.37 +0.6
1,538,954 - narZ b1468 0.56 +0.4
1,539,103 - narZ b1468 0.60 +0.3
1,539,113 + narZ b1468 0.60 -0.2
1,539,481 - narZ b1468 0.70 -0.6
1,539,813 + narZ b1468 0.79 +1.0
1,539,875 + narZ b1468 0.80 +0.1
1,539,875 + narZ b1468 0.80 +0.6
1,539,884 - narZ b1468 0.80 +0.5
1,540,463 - -0.5
1,540,622 + -0.1
1,540,622 + +0.4
1,540,720 + +0.7
1,540,790 + -0.2
1,540,922 + narU b1469 0.16 -0.2
1,540,922 + narU b1469 0.16 +1.0
1,541,002 - narU b1469 0.22 +0.3
1,541,375 - narU b1469 0.49 +0.5
1,541,375 - narU b1469 0.49 +0.0
1,541,535 + narU b1469 0.60 +0.4
1,541,599 + narU b1469 0.65 +0.9

Or see this region's nucleotide sequence