Experiment: carbon source D-Glucose 20mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt b2097 and yegT are separated by 256 nucleotides yegT and yegU overlap by 4 nucleotides yegU and yegV overlap by 4 nucleotides
b2097: b2097 - orf, hypothetical protein (VIMSS), at 2,175,534 to 2,176,586
b2097
b2098: yegT - predicted nucleoside transporter (NCBI), at 2,176,843 to 2,178,120
yegT
b2099: yegU - predicted hydrolase (NCBI), at 2,178,117 to 2,179,121
yegU
b2100: yegV - predicted kinase (NCBI), at 2,179,118 to 2,180,083
yegV
Position (kb)
2176
2177
2178
2179 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2175.975 kb on + strand, within b2097 at 2175.975 kb on + strand, within b2097 at 2176.124 kb on + strand, within b2097 at 2176.124 kb on + strand, within b2097 at 2176.175 kb on - strand, within b2097 at 2176.245 kb on + strand, within b2097 at 2176.245 kb on + strand, within b2097 at 2176.264 kb on - strand, within b2097 at 2176.292 kb on + strand, within b2097 at 2176.292 kb on + strand, within b2097 at 2176.345 kb on + strand, within b2097 at 2176.348 kb on - strand, within b2097 at 2176.419 kb on - strand, within b2097 at 2176.488 kb on - strand at 2176.488 kb on - strand at 2176.630 kb on + strand at 2176.630 kb on + strand at 2176.917 kb on - strand at 2176.917 kb on - strand at 2176.973 kb on + strand, within yegT at 2176.974 kb on - strand, within yegT at 2177.161 kb on - strand, within yegT at 2177.165 kb on - strand, within yegT at 2177.287 kb on + strand, within yegT at 2177.301 kb on - strand, within yegT at 2177.359 kb on - strand, within yegT at 2177.359 kb on - strand, within yegT at 2177.451 kb on - strand, within yegT at 2177.521 kb on + strand, within yegT at 2177.521 kb on + strand, within yegT at 2177.531 kb on - strand, within yegT at 2177.790 kb on + strand, within yegT at 2177.830 kb on + strand, within yegT at 2177.862 kb on + strand, within yegT at 2177.873 kb on + strand, within yegT at 2177.966 kb on + strand, within yegT at 2177.974 kb on - strand, within yegT at 2178.144 kb on + strand at 2178.181 kb on + strand at 2178.299 kb on + strand, within yegU at 2178.381 kb on + strand, within yegU at 2178.588 kb on - strand, within yegU at 2178.600 kb on - strand, within yegU at 2178.717 kb on - strand, within yegU at 2178.859 kb on + strand, within yegU at 2178.893 kb on + strand, within yegU at 2178.893 kb on + strand, within yegU at 2178.920 kb on + strand, within yegU at 2179.014 kb on - strand, within yegU
Per-strain Table
Position Strand Gene LocusTag Fraction carbon source D-Glucose 20mM remove 2,175,975 + b2097 b2097 0.42 -0.0 2,175,975 + b2097 b2097 0.42 +1.4 2,176,124 + b2097 b2097 0.56 -0.3 2,176,124 + b2097 b2097 0.56 -0.3 2,176,175 - b2097 b2097 0.61 +0.4 2,176,245 + b2097 b2097 0.68 -3.3 2,176,245 + b2097 b2097 0.68 +0.4 2,176,264 - b2097 b2097 0.69 +0.9 2,176,292 + b2097 b2097 0.72 +0.3 2,176,292 + b2097 b2097 0.72 -0.4 2,176,345 + b2097 b2097 0.77 +0.3 2,176,348 - b2097 b2097 0.77 -0.3 2,176,419 - b2097 b2097 0.84 -0.0 2,176,488 - -0.1 2,176,488 - -2.9 2,176,630 + +1.2 2,176,630 + +1.1 2,176,917 - +0.3 2,176,917 - +2.6 2,176,973 + yegT b2098 0.10 -3.0 2,176,974 - yegT b2098 0.10 -1.2 2,177,161 - yegT b2098 0.25 -0.1 2,177,165 - yegT b2098 0.25 -3.4 2,177,287 + yegT b2098 0.35 +0.2 2,177,301 - yegT b2098 0.36 -0.6 2,177,359 - yegT b2098 0.40 -2.3 2,177,359 - yegT b2098 0.40 +0.7 2,177,451 - yegT b2098 0.48 -0.3 2,177,521 + yegT b2098 0.53 -3.9 2,177,521 + yegT b2098 0.53 -1.2 2,177,531 - yegT b2098 0.54 +0.4 2,177,790 + yegT b2098 0.74 +0.7 2,177,830 + yegT b2098 0.77 -3.9 2,177,862 + yegT b2098 0.80 +0.0 2,177,873 + yegT b2098 0.81 -0.1 2,177,966 + yegT b2098 0.88 -1.2 2,177,974 - yegT b2098 0.88 -1.2 2,178,144 + +0.2 2,178,181 + -1.9 2,178,299 + yegU b2099 0.18 +1.1 2,178,381 + yegU b2099 0.26 +0.6 2,178,588 - yegU b2099 0.47 -0.2 2,178,600 - yegU b2099 0.48 +0.4 2,178,717 - yegU b2099 0.60 +0.3 2,178,859 + yegU b2099 0.74 +0.3 2,178,893 + yegU b2099 0.77 -2.0 2,178,893 + yegU b2099 0.77 +1.6 2,178,920 + yegU b2099 0.80 -0.2 2,179,014 - yegU b2099 0.89 -0.9
Or see this region's nucleotide sequence