Strain Fitness in Escherichia coli BW25113 around b2140

Experiment: carbon source D-Glucose 5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	carbon source D-Glucose 5mM
2,226,528	+	mdtQ	b2139	0.82	-2.6
2,226,528	+	mdtQ	b2139	0.82	+1.0
2,226,668	-				+0.2
2,226,721	+				+0.8
2,226,738	+				-0.3
2,226,753	+				+0.4
2,226,753	+				-0.1
2,226,782	+				-3.1
2,226,782	+				-2.5
2,226,794	+				+0.1
2,226,903	+				+1.3
2,226,934	+				-2.6
2,226,934	+				-0.5
2,226,942	-				+2.8
2,227,010	+				+1.2
2,227,020	+	yohP	b4679	0.19	-0.9
2,227,020	+	yohP	b4679	0.19	-2.0
2,227,047	+	yohP	b4679	0.51	-0.6
2,227,047	+	yohP	b4679	0.51	-2.2
2,227,050	+	yohP	b4679	0.55	+0.0
2,227,051	+	yohP	b4679	0.56	+0.8
2,227,052	+	yohP	b4679	0.57	-1.7
2,227,052	+	yohP	b4679	0.57	-0.2
2,227,052	+	yohP	b4679	0.57	-2.8
2,227,126	+				+2.8
2,227,158	-				+2.8
2,227,158	-				+1.8
2,227,163	-				-3.4
2,227,167	+				-2.4
2,227,168	-				-0.1
2,227,175	-				-0.1
2,227,179	-				+2.8
2,227,179	-				+2.8
2,227,336	+				-2.9
2,227,336	+				-1.7
2,227,345	+				-1.3
2,227,355	+				+0.8
2,227,432	+				+2.8
2,227,592	-	dusC	b2140	0.14	-0.7
2,227,617	-	dusC	b2140	0.17	-0.9
2,227,620	-	dusC	b2140	0.17	+1.6
2,227,620	-	dusC	b2140	0.17	+0.4
2,227,663	+	dusC	b2140	0.21	+2.8
2,227,663	+	dusC	b2140	0.21	+2.8
2,227,671	-	dusC	b2140	0.22	+0.3
2,227,671	-	dusC	b2140	0.22	+0.1
2,227,671	-	dusC	b2140	0.22	+0.8
2,227,671	-	dusC	b2140	0.22	+0.7
2,227,671	-	dusC	b2140	0.22	+1.4
2,227,674	+	dusC	b2140	0.23	+0.2
2,227,675	-	dusC	b2140	0.23	-0.0
2,227,676	-	dusC	b2140	0.23	-2.1
2,227,747	-	dusC	b2140	0.30	-0.6
2,227,752	-	dusC	b2140	0.31	-0.9
2,227,752	-	dusC	b2140	0.31	-2.3
2,227,767	+	dusC	b2140	0.32	+4.2
2,227,767	+	dusC	b2140	0.32	-2.2
2,227,791	-	dusC	b2140	0.35	+0.7
2,227,791	-	dusC	b2140	0.35	+1.5
2,227,791	-	dusC	b2140	0.35	+0.9
2,227,808	-	dusC	b2140	0.37	-1.4
2,227,808	-	dusC	b2140	0.37	-2.9
2,227,862	+	dusC	b2140	0.42	-2.4
2,227,862	+	dusC	b2140	0.42	+0.0
2,227,891	-	dusC	b2140	0.45	+1.0
2,227,918	-	dusC	b2140	0.48	-1.3
2,228,138	+	dusC	b2140	0.72	+0.5
2,228,327	-				-3.2
2,228,444	-				-1.6
2,228,444	-				-2.6
2,228,446	-				-0.4
2,228,446	-				-3.8
2,228,530	-				+0.9
2,228,542	-				+1.8
2,228,542	-				+0.9
2,228,637	-				-2.6
2,228,637	-				-0.0
2,228,716	-	yohJ	b2141	0.18	+2.6
2,228,716	-	yohJ	b2141	0.18	+0.8
2,228,753	+	yohJ	b2141	0.27	+0.2
2,228,753	+	yohJ	b2141	0.27	-1.6
2,228,951	+	yohJ	b2141	0.76	+0.7
2,229,015	+				+2.8
2,229,068	-				+0.4
2,229,123	-	yohK	b2142	0.12	+3.2
2,229,123	-	yohK	b2142	0.12	+2.1
2,229,123	-	yohK	b2142	0.12	+0.6
2,229,123	-	yohK	b2142	0.12	+2.2
2,229,190	+	yohK	b2142	0.21	+0.5
2,229,221	+	yohK	b2142	0.26	+2.0
2,229,221	+	yohK	b2142	0.26	+0.4
2,229,259	+	yohK	b2142	0.31	+1.3
2,229,272	-	yohK	b2142	0.33	-4.0
2,229,279	+	yohK	b2142	0.34	-3.5
2,229,279	+	yohK	b2142	0.34	-0.9
2,229,284	+	yohK	b2142	0.35	-0.2
2,229,284	+	yohK	b2142	0.35	-2.1
2,229,292	-	yohK	b2142	0.36	+1.7