Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05980

Experiment: NLDM_defined_nocarbon with D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined_nocarbon with D-Glucose
1,312,669	+	lysR	OKGIIK_05975	0.40	-2.6
1,312,669	+	lysR	OKGIIK_05975	0.40	-1.7
1,312,669	+	lysR	OKGIIK_05975	0.40	-0.4
1,312,669	+	lysR	OKGIIK_05975	0.40	-1.8
1,312,669	+	lysR	OKGIIK_05975	0.40	-2.7
1,312,669	+	lysR	OKGIIK_05975	0.40	-2.4
1,312,669	+	lysR	OKGIIK_05975	0.40	+1.6
1,312,669	+	lysR	OKGIIK_05975	0.40	-4.2
1,312,669	+	lysR	OKGIIK_05975	0.40	-3.1
1,312,670	-	lysR	OKGIIK_05975	0.41	-1.4
1,312,670	-	lysR	OKGIIK_05975	0.41	-2.0
1,312,670	-	lysR	OKGIIK_05975	0.41	-3.0
1,312,670	-	lysR	OKGIIK_05975	0.41	-1.9
1,312,670	-	lysR	OKGIIK_05975	0.41	-1.0
1,312,670	-	lysR	OKGIIK_05975	0.41	-2.2
1,312,670	-	lysR	OKGIIK_05975	0.41	-3.2
1,312,670	-	lysR	OKGIIK_05975	0.41	-3.2
1,312,906	+	lysR	OKGIIK_05975	0.64	-1.0
1,312,906	+	lysR	OKGIIK_05975	0.64	-1.4
1,312,906	+	lysR	OKGIIK_05975	0.64	-1.0
1,312,906	+	lysR	OKGIIK_05975	0.64	-1.6
1,312,907	-	lysR	OKGIIK_05975	0.64	-1.4
1,312,907	-	lysR	OKGIIK_05975	0.64	-2.0
1,312,907	-	lysR	OKGIIK_05975	0.64	-3.2
1,313,086	-	lysR	OKGIIK_05975	0.82	-1.0
1,313,239	+				-2.2
1,313,239	+				-2.2
1,313,239	+				-1.0
1,313,239	+				-0.6
1,313,240	-				-2.6
1,313,240	-				-3.2
1,313,240	-				-2.2
1,313,244	+				-3.5
1,313,244	+				-1.4
1,313,244	+				-1.7
1,313,244	+				-2.4
1,313,244	+				-4.1
1,313,244	+				-1.0
1,313,244	+				-2.4
1,313,244	+				-0.6
1,313,244	+				-2.0
1,313,244	+				-1.4
1,313,244	+				-1.0
1,313,244	+				-2.2
1,313,244	+				-1.4
1,313,244	+				-1.7
1,313,244	+				-3.2
1,313,244	+				-2.1
1,313,244	+				-2.6
1,313,245	-				-1.2
1,313,245	-				-0.4
1,313,245	-				-2.8
1,313,245	-				-0.8
1,313,245	-				-1.4
1,313,245	-				-3.2
1,313,245	-				-1.7
1,313,245	-				-1.7
1,313,245	-				-2.4
1,313,245	-				+0.6
1,313,245	-				-2.4
1,313,245	-				-1.7
1,313,245	-				-2.6
1,313,245	-				-1.4
1,313,245	-				-2.4
1,313,245	-				-1.9
1,313,319	+				+0.4
1,313,319	+				-1.8
1,313,319	+				+0.3
1,313,319	+				-0.3
1,313,319	+				+1.1
1,313,319	+				-0.5
1,313,319	+				-2.8
1,313,319	+				+0.6
1,313,319	+				-1.0
1,313,319	+				-0.9
1,313,320	-				-1.7
1,313,320	-				-1.2
1,313,320	-				-1.4
1,313,320	-				-0.3
1,313,320	-				-2.7
1,313,320	-				-0.4
1,313,320	-				+0.6
1,313,320	-				-0.0
1,313,320	-				-1.7
1,313,320	-				-1.7
1,313,320	-				-0.3
1,313,430	+				-0.4
1,313,430	+				-1.6
1,313,430	+				+0.1
1,313,430	+				+0.6
1,313,430	+				-1.7
1,313,430	+				-1.4
1,313,430	+				-1.6
1,313,431	-				-0.4
1,313,431	-				-2.7
1,313,431	-				+1.0
1,313,431	-				-0.5
1,313,431	-				-1.6
1,313,431	-				+0.3
1,313,431	-				+1.3
1,313,432	+				-2.4
1,313,432	+				-0.5
1,313,432	+				-1.0
1,313,432	+				-2.6
1,313,432	+				+0.1
1,313,432	+				-0.1
1,313,432	+				-1.4
1,313,432	+				-2.6
1,313,433	-				+0.6
1,313,433	-				-0.7
1,313,433	-				-1.2
1,313,433	-				+0.1
1,313,433	-				-0.6
1,313,433	-				+0.6
1,313,433	-				-0.7
1,313,433	-				+0.3
1,313,433	-				-0.2
1,313,433	-				-1.2
1,313,433	-				+0.6
1,313,438	+				-0.2
1,313,438	+				-1.9
1,313,482	+				+2.6
1,313,496	-				-0.2
1,313,541	-				-2.8
1,313,592	+				-1.7
1,313,592	+				-0.8
1,313,592	+				-2.9
1,313,592	+				-1.2
1,313,593	-				-1.7
1,313,593	-				-3.3
1,313,593	-				-1.7
1,313,593	-				-3.7
1,314,118	-	cysG	OKGIIK_05980	0.36	-2.4
1,314,118	-	cysG	OKGIIK_05980	0.36	-3.0
1,314,439	+	cysG	OKGIIK_05980	0.58	+0.6
1,314,439	+	cysG	OKGIIK_05980	0.58	-2.2
1,314,439	+	cysG	OKGIIK_05980	0.58	-4.6
1,314,439	+	cysG	OKGIIK_05980	0.58	+0.6
1,314,440	-	cysG	OKGIIK_05980	0.58	-0.4
1,314,440	-	cysG	OKGIIK_05980	0.58	-2.2
1,314,440	-	cysG	OKGIIK_05980	0.58	-1.6
1,314,552	+	cysG	OKGIIK_05980	0.66	+0.6
1,314,552	+	cysG	OKGIIK_05980	0.66	-1.0
1,314,552	+	cysG	OKGIIK_05980	0.66	+1.6
1,314,553	-	cysG	OKGIIK_05980	0.66	-2.0
1,314,553	-	cysG	OKGIIK_05980	0.66	+0.6
1,314,553	-	cysG	OKGIIK_05980	0.66	-1.7
1,314,553	-	cysG	OKGIIK_05980	0.66	-3.2
1,314,726	+	cysG	OKGIIK_05980	0.78	-1.4
1,314,726	+	cysG	OKGIIK_05980	0.78	-0.8
1,314,726	+	cysG	OKGIIK_05980	0.78	-2.4
1,314,726	+	cysG	OKGIIK_05980	0.78	-2.0
1,314,726	+	cysG	OKGIIK_05980	0.78	-1.2
1,314,726	+	cysG	OKGIIK_05980	0.78	-1.7
1,314,726	+	cysG	OKGIIK_05980	0.78	-1.4
1,314,726	+	cysG	OKGIIK_05980	0.78	-1.0
1,314,726	+	cysG	OKGIIK_05980	0.78	-1.7
1,314,726	+	cysG	OKGIIK_05980	0.78	-2.2
1,314,726	+	cysG	OKGIIK_05980	0.78	-0.4
1,314,726	+	cysG	OKGIIK_05980	0.78	-2.6
1,314,727	-	cysG	OKGIIK_05980	0.78	-0.4
1,314,727	-	cysG	OKGIIK_05980	0.78	-1.7
1,314,727	-	cysG	OKGIIK_05980	0.78	-1.7
1,314,727	-	cysG	OKGIIK_05980	0.78	-2.6
1,314,727	-	cysG	OKGIIK_05980	0.78	-2.8
1,314,727	-	cysG	OKGIIK_05980	0.78	-1.4
1,314,727	-	cysG	OKGIIK_05980	0.78	-2.7
1,314,727	-	cysG	OKGIIK_05980	0.78	-1.7
1,314,727	-	cysG	OKGIIK_05980	0.78	-2.4
1,314,727	-	cysG	OKGIIK_05980	0.78	-1.8
1,315,056	+				+1.6
1,315,056	+				+0.6
1,315,056	+				-0.6
1,315,056	+				-2.0
1,315,056	+				+0.9
1,315,057	-				-1.2
1,315,057	-				-1.4
1,315,057	-				+0.9
1,315,057	-				-0.2
1,315,057	-				-2.0
1,315,057	-				+0.8
1,315,057	-				+0.2
1,315,057	-				+1.3
1,315,157	+				-2.0
1,315,158	-				-3.1
1,315,206	+				-1.0
1,315,206	+				-0.4
1,315,206	+				+1.3
1,315,206	+				+0.9
1,315,206	+				+2.8
1,315,206	+				+2.9
1,315,206	+				-0.8
1,315,206	+				-0.1
1,315,206	+				-1.4
1,315,206	+				+0.3
1,315,206	+				-2.6
1,315,206	+				-1.0
1,315,206	+				+1.2
1,315,206	+				+0.9
1,315,206	+				-2.2
1,315,206	+				+0.3
1,315,206	+				-0.4
1,315,206	+				+0.1
1,315,206	+				-0.7
1,315,206	+				-3.0
1,315,206	+				-0.6
1,315,206	+				-0.4
1,315,206	+				-1.7
1,315,207	-				-0.3
1,315,207	-				-0.7
1,315,207	-				+0.1
1,315,207	-				+1.1
1,315,207	-				+0.4
1,315,207	-				+0.9
1,315,207	-				-0.3
1,315,440	+	cysK	OKGIIK_05985	0.34	+1.6
1,315,440	+	cysK	OKGIIK_05985	0.34	-0.4
1,315,569	+	cysK	OKGIIK_05985	0.48	+0.1
1,315,569	+	cysK	OKGIIK_05985	0.48	-0.7
1,315,569	+	cysK	OKGIIK_05985	0.48	-0.1
1,315,569	+	cysK	OKGIIK_05985	0.48	-0.5
1,315,569	+	cysK	OKGIIK_05985	0.48	-0.4
1,315,569	+	cysK	OKGIIK_05985	0.48	+0.6
1,315,569	+	cysK	OKGIIK_05985	0.48	-1.0
1,315,569	+	cysK	OKGIIK_05985	0.48	+0.2
1,315,570	-	cysK	OKGIIK_05985	0.48	-1.1
1,315,570	-	cysK	OKGIIK_05985	0.48	+0.6
1,315,570	-	cysK	OKGIIK_05985	0.48	+0.6
1,315,629	+	cysK	OKGIIK_05985	0.54	-0.7
1,315,629	+	cysK	OKGIIK_05985	0.54	+0.0
1,315,629	+	cysK	OKGIIK_05985	0.54	-1.7
1,315,629	+	cysK	OKGIIK_05985	0.54	-0.6
1,315,629	+	cysK	OKGIIK_05985	0.54	-2.2
1,315,629	+	cysK	OKGIIK_05985	0.54	+0.1
1,315,629	+	cysK	OKGIIK_05985	0.54	-1.2
1,315,629	+	cysK	OKGIIK_05985	0.54	+0.8
1,315,629	+	cysK	OKGIIK_05985	0.54	-2.0
1,315,629	+	cysK	OKGIIK_05985	0.54	-0.7
1,315,629	+	cysK	OKGIIK_05985	0.54	-0.3
1,315,629	+	cysK	OKGIIK_05985	0.54	-1.7
1,315,630	-	cysK	OKGIIK_05985	0.54	+0.9
1,315,630	-	cysK	OKGIIK_05985	0.54	+0.1
1,315,630	-	cysK	OKGIIK_05985	0.54	-1.4
1,315,630	-	cysK	OKGIIK_05985	0.54	-0.8
1,315,630	-	cysK	OKGIIK_05985	0.54	-0.6
1,315,630	-	cysK	OKGIIK_05985	0.54	+0.4
1,315,630	-	cysK	OKGIIK_05985	0.54	+1.0
1,315,630	-	cysK	OKGIIK_05985	0.54	+0.6
1,315,630	-	cysK	OKGIIK_05985	0.54	+0.6
1,315,865	+	cysK	OKGIIK_05985	0.79	-0.6
1,315,865	+	cysK	OKGIIK_05985	0.79	-0.6
1,315,866	-	cysK	OKGIIK_05985	0.79	-0.8
1,315,866	-	cysK	OKGIIK_05985	0.79	-1.7
1,315,866	-	cysK	OKGIIK_05985	0.79	+0.6
1,315,907	+	cysK	OKGIIK_05985	0.84	+0.6
1,315,907	+	cysK	OKGIIK_05985	0.84	+0.7
1,315,907	+	cysK	OKGIIK_05985	0.84	+2.2
1,315,907	+	cysK	OKGIIK_05985	0.84	-1.0
1,315,907	+	cysK	OKGIIK_05985	0.84	-2.2
1,315,908	-	cysK	OKGIIK_05985	0.84	-2.6
1,315,908	-	cysK	OKGIIK_05985	0.84	-0.5
1,315,908	-	cysK	OKGIIK_05985	0.84	-2.7
1,315,908	-	cysK	OKGIIK_05985	0.84	-1.2
1,315,908	-	cysK	OKGIIK_05985	0.84	-1.0
1,315,908	-	cysK	OKGIIK_05985	0.84	+0.6
1,315,908	-	cysK	OKGIIK_05985	0.84	+0.2
1,316,007	+				-1.2
1,316,007	+				-0.4
1,316,007	+				-1.4
1,316,007	+				-1.3
1,316,007	+				-0.6
1,316,007	+				-1.4
1,316,007	+				-2.4
1,316,007	+				-1.0
1,316,008	-				+0.1
1,316,008	-				-1.7
1,316,008	-				-1.8
1,316,008	-				+0.1