Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_04960

Experiment: NLDM_defined_nocarbon with D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined_nocarbon with D-Glucose
1,075,746	+	hisC	OKGIIK_04955	0.18	-1.4
1,075,746	+	hisC	OKGIIK_04955	0.18	-2.4
1,075,746	+	hisC	OKGIIK_04955	0.18	-3.4
1,075,746	+	hisC	OKGIIK_04955	0.18	-1.9
1,075,747	-	hisC	OKGIIK_04955	0.18	-2.8
1,075,747	-	hisC	OKGIIK_04955	0.18	-1.7
1,075,747	-	hisC	OKGIIK_04955	0.18	-3.4
1,075,843	+	hisC	OKGIIK_04955	0.27	-4.7
1,075,843	+	hisC	OKGIIK_04955	0.27	-2.8
1,075,844	-	hisC	OKGIIK_04955	0.27	-3.9
1,075,844	-	hisC	OKGIIK_04955	0.27	-2.8
1,075,872	+	hisC	OKGIIK_04955	0.30	-1.7
1,075,872	+	hisC	OKGIIK_04955	0.30	+0.1
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.5
1,075,872	+	hisC	OKGIIK_04955	0.30	-1.7
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.5
1,075,872	+	hisC	OKGIIK_04955	0.30	-1.4
1,075,872	+	hisC	OKGIIK_04955	0.30	-3.4
1,075,872	+	hisC	OKGIIK_04955	0.30	-3.1
1,075,872	+	hisC	OKGIIK_04955	0.30	-3.5
1,075,872	+	hisC	OKGIIK_04955	0.30	-0.9
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.2
1,075,872	+	hisC	OKGIIK_04955	0.30	-0.9
1,075,872	+	hisC	OKGIIK_04955	0.30	-4.6
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.9
1,075,872	+	hisC	OKGIIK_04955	0.30	-1.4
1,075,872	+	hisC	OKGIIK_04955	0.30	-1.7
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.9
1,075,872	+	hisC	OKGIIK_04955	0.30	-0.4
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.7
1,075,873	-	hisC	OKGIIK_04955	0.30	-1.4
1,075,873	-	hisC	OKGIIK_04955	0.30	-3.7
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.2
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.4
1,075,873	-	hisC	OKGIIK_04955	0.30	-0.4
1,075,873	-	hisC	OKGIIK_04955	0.30	-0.4
1,075,873	-	hisC	OKGIIK_04955	0.30	-1.4
1,075,873	-	hisC	OKGIIK_04955	0.30	-1.9
1,075,873	-	hisC	OKGIIK_04955	0.30	-0.4
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.5
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.2
1,075,873	-	hisC	OKGIIK_04955	0.30	-1.9
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.2
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.9
1,076,097	+	hisC	OKGIIK_04955	0.50	-3.5
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.4
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.7
1,076,097	+	hisC	OKGIIK_04955	0.50	-0.9
1,076,097	+	hisC	OKGIIK_04955	0.50	-0.9
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.5
1,076,097	+	hisC	OKGIIK_04955	0.50	-3.7
1,076,097	+	hisC	OKGIIK_04955	0.50	-3.2
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.9
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.2
1,076,097	+	hisC	OKGIIK_04955	0.50	-4.0
1,076,097	+	hisC	OKGIIK_04955	0.50	-0.9
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.5
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.7
1,076,097	+	hisC	OKGIIK_04955	0.50	-3.2
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.4
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.2
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.9
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.5
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.8
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.7
1,076,097	+	hisC	OKGIIK_04955	0.50	-0.4
1,076,098	-	hisC	OKGIIK_04955	0.50	+0.6
1,076,098	-	hisC	OKGIIK_04955	0.50	-2.8
1,076,098	-	hisC	OKGIIK_04955	0.50	-2.2
1,076,098	-	hisC	OKGIIK_04955	0.50	-2.2
1,076,098	-	hisC	OKGIIK_04955	0.50	-2.3
1,076,098	-	hisC	OKGIIK_04955	0.50	-3.4
1,076,098	-	hisC	OKGIIK_04955	0.50	-2.2
1,076,098	-	hisC	OKGIIK_04955	0.50	-1.9
1,076,098	-	hisC	OKGIIK_04955	0.50	+0.6
1,076,098	-	hisC	OKGIIK_04955	0.50	-1.7
1,076,098	-	hisC	OKGIIK_04955	0.50	-1.5
1,076,204	+	hisC	OKGIIK_04955	0.60	-1.7
1,076,443	+	hisC	OKGIIK_04955	0.82	-1.7
1,076,443	+	hisC	OKGIIK_04955	0.82	-2.4
1,076,444	-	hisC	OKGIIK_04955	0.82	-2.8
1,076,444	-	hisC	OKGIIK_04955	0.82	-2.9
1,076,444	-	hisC	OKGIIK_04955	0.82	-1.9
1,076,444	-	hisC	OKGIIK_04955	0.82	-0.5
1,076,587	+				-2.4
1,076,587	+				+0.6
1,076,588	-				-1.1
1,076,588	-				-2.4
1,076,652	+				+0.4
1,076,652	+				+1.2
1,076,652	+				-0.4
1,076,653	-				-1.9
1,076,653	-				-3.7
1,076,653	-				-1.9
1,076,653	-				-2.6
1,076,653	-				-0.5
1,076,653	-				-1.7
1,076,653	-				-2.8
1,076,714	+				-0.9
1,076,714	+				-3.6
1,076,714	+				-3.4
1,076,715	-				-2.9
1,076,715	-				-0.7
1,076,715	-				-1.7
1,076,975	+	hisB	OKGIIK_04960	0.32	-0.4
1,076,975	+	hisB	OKGIIK_04960	0.32	-1.9
1,076,975	+	hisB	OKGIIK_04960	0.32	-1.9
1,076,976	-	hisB	OKGIIK_04960	0.32	-3.6
1,076,976	-	hisB	OKGIIK_04960	0.32	-0.9
1,076,976	-	hisB	OKGIIK_04960	0.32	-4.3
1,077,467	+	hisB	OKGIIK_04960	0.78	-1.7
1,077,467	+	hisB	OKGIIK_04960	0.78	-1.4
1,077,467	+	hisB	OKGIIK_04960	0.78	-3.8
1,077,467	+	hisB	OKGIIK_04960	0.78	-3.4
1,077,467	+	hisB	OKGIIK_04960	0.78	-4.1
1,077,467	+	hisB	OKGIIK_04960	0.78	-3.3
1,077,467	+	hisB	OKGIIK_04960	0.78	-1.5
1,077,467	+	hisB	OKGIIK_04960	0.78	-1.6
1,077,468	-	hisB	OKGIIK_04960	0.78	-2.5
1,077,468	-	hisB	OKGIIK_04960	0.78	-1.9
1,077,468	-	hisB	OKGIIK_04960	0.78	-0.4
1,077,468	-	hisB	OKGIIK_04960	0.78	-2.2
1,077,468	-	hisB	OKGIIK_04960	0.78	-2.4
1,077,468	-	hisB	OKGIIK_04960	0.78	-1.9
1,077,468	-	hisB	OKGIIK_04960	0.78	-0.9
1,077,468	-	hisB	OKGIIK_04960	0.78	-3.3
1,077,504	+	hisB	OKGIIK_04960	0.81	-1.2
1,077,505	-	hisB	OKGIIK_04960	0.81	-2.2
1,077,701	+				-1.6
1,077,701	+				+1.3
1,077,701	+				+0.4
1,077,701	+				-1.7
1,077,701	+				-0.1
1,077,701	+				-0.9
1,077,701	+				+2.2
1,077,701	+				+0.2
1,077,701	+				+0.6
1,077,701	+				-0.1
1,077,701	+				+0.6
1,077,701	+				-2.4
1,077,702	-				-1.9
1,077,702	-				-1.8
1,077,702	-				+0.6
1,077,702	-				+0.2
1,077,702	-				-1.4
1,077,702	-				-0.9
1,077,702	-				-0.5
1,077,702	-				-2.2
1,077,702	-				-2.2
1,077,702	-				-3.3
1,077,702	-				-2.9
1,077,702	-				-3.8
1,077,702	-				-1.6
1,077,750	+				+2.2
1,077,750	+				+2.1
1,077,751	-				-1.4
1,077,751	-				-2.2
1,077,751	-				-0.9
1,077,751	-				-2.8
1,077,751	-				-1.7
1,077,808	+				-1.9
1,077,808	+				-1.7
1,077,808	+				-3.2
1,077,808	+				-0.4
1,077,808	+				-3.9
1,077,808	+				-0.6
1,077,808	+				-0.7
1,077,808	+				-0.4
1,077,809	-				-2.5
1,077,809	-				-1.9
1,077,809	-				-2.4
1,077,809	-				-1.4
1,077,809	-				+0.6
1,077,809	-				-3.1
1,077,809	-				-1.4
1,077,809	-				-2.5
1,077,809	-				-0.4
1,077,859	+				-1.4
1,077,859	+				-1.4
1,077,859	+				+1.0
1,078,157	+	hisH	OKGIIK_04965	0.58	-2.7
1,078,157	+	hisH	OKGIIK_04965	0.58	-2.2
1,078,157	+	hisH	OKGIIK_04965	0.58	-1.7
1,078,157	+	hisH	OKGIIK_04965	0.58	-3.7
1,078,158	-	hisH	OKGIIK_04965	0.58	-2.5
1,078,158	-	hisH	OKGIIK_04965	0.58	-1.4
1,078,230	+	hisH	OKGIIK_04965	0.70	-2.2
1,078,230	+	hisH	OKGIIK_04965	0.70	-2.2
1,078,230	+	hisH	OKGIIK_04965	0.70	-2.9
1,078,230	+	hisH	OKGIIK_04965	0.70	-1.9
1,078,230	+	hisH	OKGIIK_04965	0.70	-1.9
1,078,230	+	hisH	OKGIIK_04965	0.70	-2.9
1,078,230	+	hisH	OKGIIK_04965	0.70	-2.4
1,078,231	-	hisH	OKGIIK_04965	0.71	-3.8
1,078,231	-	hisH	OKGIIK_04965	0.71	-2.8
1,078,231	-	hisH	OKGIIK_04965	0.71	-1.7
1,078,231	-	hisH	OKGIIK_04965	0.71	-2.7
1,078,245	+	hisH	OKGIIK_04965	0.73	-2.2
1,078,245	+	hisH	OKGIIK_04965	0.73	-3.7
1,078,245	+	hisH	OKGIIK_04965	0.73	-1.7
1,078,245	+	hisH	OKGIIK_04965	0.73	-1.9
1,078,245	+	hisH	OKGIIK_04965	0.73	-1.7
1,078,245	+	hisH	OKGIIK_04965	0.73	-2.4
1,078,245	+	hisH	OKGIIK_04965	0.73	-0.4
1,078,245	+	hisH	OKGIIK_04965	0.73	-0.9
1,078,245	+	hisH	OKGIIK_04965	0.73	-2.2
1,078,245	+	hisH	OKGIIK_04965	0.73	-2.5
1,078,245	+	hisH	OKGIIK_04965	0.73	-2.2
1,078,245	+	hisH	OKGIIK_04965	0.73	-0.9
1,078,246	-	hisH	OKGIIK_04965	0.73	-1.9
1,078,246	-	hisH	OKGIIK_04965	0.73	-1.7
1,078,246	-	hisH	OKGIIK_04965	0.73	-1.9
1,078,246	-	hisH	OKGIIK_04965	0.73	-3.1
1,078,246	-	hisH	OKGIIK_04965	0.73	-3.4
1,078,246	-	hisH	OKGIIK_04965	0.73	-2.5
1,078,399	+				-1.4
1,078,399	+				-0.9
1,078,399	+				+0.2
1,078,399	+				+0.6
1,078,399	+				-0.1
1,078,399	+				+0.4
1,078,399	+				-0.5
1,078,399	+				-1.4
1,078,399	+				-2.5
1,078,400	-				-1.7
1,078,400	-				-1.7
1,078,400	-				-2.7
1,078,400	-				-1.7
1,078,400	-				-0.7
1,078,400	-				-2.9
1,078,400	-				-4.3
1,078,400	-				-0.4
1,078,400	-				-1.5
1,078,469	+				-1.4
1,078,470	-				-0.4
1,078,470	-				-1.9
1,078,470	-				-0.9
1,078,470	-				-1.7
1,078,487	+	hisA	OKGIIK_04970	0.12	-1.4
1,078,487	+	hisA	OKGIIK_04970	0.12	-1.4
1,078,487	+	hisA	OKGIIK_04970	0.12	-0.9
1,078,487	+	hisA	OKGIIK_04970	0.12	-3.3
1,078,487	+	hisA	OKGIIK_04970	0.12	-2.9
1,078,487	+	hisA	OKGIIK_04970	0.12	-0.4
1,078,487	+	hisA	OKGIIK_04970	0.12	-1.2
1,078,487	+	hisA	OKGIIK_04970	0.12	-1.9
1,078,488	-	hisA	OKGIIK_04970	0.12	-2.4
1,078,488	-	hisA	OKGIIK_04970	0.12	-1.9
1,078,488	-	hisA	OKGIIK_04970	0.12	-1.7
1,078,488	-	hisA	OKGIIK_04970	0.12	-4.0
1,078,488	-	hisA	OKGIIK_04970	0.12	-3.4
1,078,488	-	hisA	OKGIIK_04970	0.12	+1.2
1,078,488	-	hisA	OKGIIK_04970	0.12	-2.5
1,078,488	-	hisA	OKGIIK_04970	0.12	-3.2
1,078,488	-	hisA	OKGIIK_04970	0.12	-2.5
1,078,488	-	hisA	OKGIIK_04970	0.12	-1.4
1,078,488	-	hisA	OKGIIK_04970	0.12	-3.1
1,078,488	-	hisA	OKGIIK_04970	0.12	-0.4
1,078,488	-	hisA	OKGIIK_04970	0.12	-2.2
1,078,488	-	hisA	OKGIIK_04970	0.12	-1.4
1,078,488	-	hisA	OKGIIK_04970	0.12	-4.8
1,078,488	-	hisA	OKGIIK_04970	0.12	-3.1
1,078,488	-	hisA	OKGIIK_04970	0.12	-1.4
1,078,521	-	hisA	OKGIIK_04970	0.17	-4.2
1,078,521	-	hisA	OKGIIK_04970	0.17	-2.5
1,078,650	+	hisA	OKGIIK_04970	0.34	-1.4
1,078,651	-	hisA	OKGIIK_04970	0.34	-2.8
1,078,651	-	hisA	OKGIIK_04970	0.34	-2.2