Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16625

Experiment: NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
3,650,317	+	ccmA	OKGIIK_16620	0.37	-0.5
3,650,317	+	ccmA	OKGIIK_16620	0.37	-1.0
3,650,317	+	ccmA	OKGIIK_16620	0.37	-0.5
3,650,317	+	ccmA	OKGIIK_16620	0.37	-1.0
3,650,317	+	ccmA	OKGIIK_16620	0.37	+0.6
3,650,317	+	ccmA	OKGIIK_16620	0.37	-0.4
3,650,317	+	ccmA	OKGIIK_16620	0.37	+1.0
3,650,318	-	ccmA	OKGIIK_16620	0.37	-1.5
3,650,318	-	ccmA	OKGIIK_16620	0.37	+0.3
3,650,318	-	ccmA	OKGIIK_16620	0.37	-1.4
3,650,318	-	ccmA	OKGIIK_16620	0.37	-1.4
3,650,318	-	ccmA	OKGIIK_16620	0.37	+0.5
3,650,542	+	ccmA	OKGIIK_16620	0.61	-0.4
3,650,542	+	ccmA	OKGIIK_16620	0.61	-0.4
3,650,542	+	ccmA	OKGIIK_16620	0.61	-1.3
3,650,542	+	ccmA	OKGIIK_16620	0.61	-0.5
3,650,542	+	ccmA	OKGIIK_16620	0.61	-1.5
3,650,542	+	ccmA	OKGIIK_16620	0.61	+0.5
3,650,542	+	ccmA	OKGIIK_16620	0.61	+0.2
3,650,543	-	ccmA	OKGIIK_16620	0.61	-2.0
3,650,543	-	ccmA	OKGIIK_16620	0.61	+0.6
3,650,543	-	ccmA	OKGIIK_16620	0.61	+0.0
3,650,543	-	ccmA	OKGIIK_16620	0.61	-2.1
3,650,543	-	ccmA	OKGIIK_16620	0.61	-1.8
3,650,543	-	ccmA	OKGIIK_16620	0.61	-0.1
3,650,543	-	ccmA	OKGIIK_16620	0.61	+1.0
3,650,543	-	ccmA	OKGIIK_16620	0.61	-2.3
3,650,543	-	ccmA	OKGIIK_16620	0.61	-1.3
3,650,543	-	ccmA	OKGIIK_16620	0.61	+0.6
3,650,543	-	ccmA	OKGIIK_16620	0.61	+0.3
3,650,543	-	ccmA	OKGIIK_16620	0.61	+0.1
3,650,543	-	ccmA	OKGIIK_16620	0.61	-1.0
3,650,584	+	ccmA	OKGIIK_16620	0.65	-1.5
3,650,585	-	ccmA	OKGIIK_16620	0.65	+1.4
3,650,585	-	ccmA	OKGIIK_16620	0.65	+0.5
3,650,585	-	ccmA	OKGIIK_16620	0.65	+0.0
3,650,585	-	ccmA	OKGIIK_16620	0.65	-1.3
3,650,860	+				+0.0
3,650,860	+				+0.9
3,650,860	+				+1.0
3,650,860	+				+0.6
3,650,861	-				+1.0
3,650,861	-				+0.5
3,650,861	-				+0.4
3,650,861	-				+0.8
3,650,861	-				-2.3
3,650,900	+				-0.1
3,650,900	+				+0.2
3,650,900	+				-0.3
3,650,901	-				-1.5
3,650,901	-				-1.1
3,650,901	-				-2.3
3,650,901	-				-0.6
3,650,901	-				+0.3
3,650,901	-				+0.5
3,650,901	-				-0.0
3,650,901	-				-0.5
3,650,947	+				-0.0
3,650,947	+				+0.7
3,650,947	+				-1.8
3,650,947	+				-0.2
3,650,947	+				+0.1
3,650,947	+				+0.6
3,650,947	+				+1.1
3,650,947	+				+1.4
3,650,947	+				-0.1
3,650,947	+				+2.0
3,650,947	+				-2.3
3,650,947	+				-0.3
3,650,947	+				-0.3
3,650,948	-				-0.5
3,650,948	-				+1.5
3,650,948	-				-0.3
3,650,948	-				-0.4
3,650,948	-				-1.8
3,650,948	-				+0.2
3,650,948	-				+0.6
3,650,948	-				-0.1
3,650,950	+				+0.0
3,650,950	+				+0.9
3,650,950	+				+1.0
3,650,950	+				+1.2
3,650,950	+				-0.5
3,650,950	+				+0.3
3,650,950	+				+1.0
3,650,950	+				-0.3
3,650,950	+				+1.6
3,650,950	+				-0.8
3,650,950	+				-0.4
3,650,950	+				+0.0
3,650,950	+				-1.9
3,650,950	+				+0.6
3,650,950	+				-1.3
3,650,950	+				-0.9
3,650,950	+				-0.7
3,650,950	+				-0.8
3,650,950	+				-0.2
3,650,950	+				+1.9
3,650,950	+				-1.3
3,650,950	+				-0.1
3,650,950	+				+0.5
3,650,950	+				+0.4
3,650,950	+				+0.7
3,650,951	-				-2.0
3,650,951	-				+0.8
3,650,951	-				+0.0
3,650,951	-				+0.8
3,650,951	-				+0.2
3,650,951	-				+1.6
3,650,951	-				-0.2
3,650,951	-				-0.4
3,650,951	-				-0.6
3,650,951	-				-0.7
3,650,951	-				-0.5
3,650,951	-				+1.0
3,650,951	-				-0.3
3,650,951	-				+0.3
3,650,951	-				-1.4
3,650,951	-				+0.3
3,650,951	-				+1.2
3,650,951	-				-1.8
3,650,951	-				-0.2
3,650,951	-				+1.2
3,650,951	-				-0.3
3,650,951	-				+0.0
3,650,951	-				+0.7
3,650,952	+				-0.5
3,650,952	+				+0.6
3,650,952	+				-0.5
3,650,952	+				-1.3
3,650,952	+				-1.0
3,650,952	+				+0.2
3,650,952	+				-2.1
3,650,953	-				-0.1
3,650,953	-				+1.4
3,650,960	+				-0.5
3,651,149	+		OKGIIK_16625	0.18	-0.5
3,651,149	+		OKGIIK_16625	0.18	-0.5
3,651,149	+		OKGIIK_16625	0.18	-3.1
3,651,149	+		OKGIIK_16625	0.18	-1.0
3,651,149	+		OKGIIK_16625	0.18	-1.3
3,651,149	+		OKGIIK_16625	0.18	-1.0
3,651,150	-		OKGIIK_16625	0.18	+2.4
3,651,150	-		OKGIIK_16625	0.18	-1.8
3,651,150	-		OKGIIK_16625	0.18	+0.0
3,651,179	+		OKGIIK_16625	0.22	-3.3
3,651,179	+		OKGIIK_16625	0.22	-1.0
3,651,179	+		OKGIIK_16625	0.22	-2.0
3,651,179	+		OKGIIK_16625	0.22	-2.0
3,651,179	+		OKGIIK_16625	0.22	-3.3
3,651,179	+		OKGIIK_16625	0.22	-3.0
3,651,179	+		OKGIIK_16625	0.22	-3.0
3,651,179	+		OKGIIK_16625	0.22	-0.8
3,651,179	+		OKGIIK_16625	0.22	+0.0
3,651,180	-		OKGIIK_16625	0.22	-2.3
3,651,180	-		OKGIIK_16625	0.22	-2.8
3,651,180	-		OKGIIK_16625	0.22	-3.2
3,651,180	-		OKGIIK_16625	0.22	-1.3
3,651,180	-		OKGIIK_16625	0.22	+0.0
3,651,242	+		OKGIIK_16625	0.31	-1.3
3,651,242	+		OKGIIK_16625	0.31	+3.0
3,651,242	+		OKGIIK_16625	0.31	-1.1
3,651,242	+		OKGIIK_16625	0.31	-2.1
3,651,242	+		OKGIIK_16625	0.31	-1.8
3,651,242	+		OKGIIK_16625	0.31	-2.4
3,651,242	+		OKGIIK_16625	0.31	+1.0
3,651,242	+		OKGIIK_16625	0.31	-1.8
3,651,242	+		OKGIIK_16625	0.31	-1.3
3,651,242	+		OKGIIK_16625	0.31	-2.0
3,651,242	+		OKGIIK_16625	0.31	+1.3
3,651,242	+		OKGIIK_16625	0.31	+1.0
3,651,242	+		OKGIIK_16625	0.31	-1.0
3,651,242	+		OKGIIK_16625	0.31	-2.3
3,651,242	+		OKGIIK_16625	0.31	-2.0
3,651,242	+		OKGIIK_16625	0.31	-1.3
3,651,242	+		OKGIIK_16625	0.31	-1.0
3,651,243	-		OKGIIK_16625	0.31	-2.1
3,651,243	-		OKGIIK_16625	0.31	-1.0
3,651,243	-		OKGIIK_16625	0.31	-1.3
3,651,243	-		OKGIIK_16625	0.31	-1.2
3,651,243	-		OKGIIK_16625	0.31	+2.0
3,651,243	-		OKGIIK_16625	0.31	-1.0
3,651,243	-		OKGIIK_16625	0.31	-1.0
3,651,243	-		OKGIIK_16625	0.31	-0.8
3,651,243	-		OKGIIK_16625	0.31	-1.8
3,651,243	-		OKGIIK_16625	0.31	-2.1
3,651,243	-		OKGIIK_16625	0.31	-1.0
3,651,243	-		OKGIIK_16625	0.31	+1.6
3,651,243	-		OKGIIK_16625	0.31	-0.5
3,651,243	-		OKGIIK_16625	0.31	+0.6
3,651,243	-		OKGIIK_16625	0.31	-2.0
3,651,243	-		OKGIIK_16625	0.31	-1.0
3,651,243	-		OKGIIK_16625	0.31	-1.8
3,651,243	-		OKGIIK_16625	0.31	-3.6
3,651,243	-		OKGIIK_16625	0.31	-0.4
3,651,243	-		OKGIIK_16625	0.31	-2.7
3,651,243	-		OKGIIK_16625	0.31	-0.5
3,651,243	-		OKGIIK_16625	0.31	-1.5
3,651,243	-		OKGIIK_16625	0.31	-0.1
3,651,243	-		OKGIIK_16625	0.31	-1.5
3,651,243	-		OKGIIK_16625	0.31	-2.4
3,651,243	-		OKGIIK_16625	0.31	+0.0
3,651,317	+		OKGIIK_16625	0.41	-2.0
3,651,317	+		OKGIIK_16625	0.41	+0.5
3,651,359	+		OKGIIK_16625	0.46	+0.0
3,651,359	+		OKGIIK_16625	0.46	-0.5
3,651,359	+		OKGIIK_16625	0.46	-2.0
3,651,359	+		OKGIIK_16625	0.46	+1.0
3,651,359	+		OKGIIK_16625	0.46	-1.6
3,651,359	+		OKGIIK_16625	0.46	-0.5
3,651,360	-		OKGIIK_16625	0.46	+0.3
3,651,360	-		OKGIIK_16625	0.46	-2.3
3,651,360	-		OKGIIK_16625	0.46	-1.5
3,651,395	+		OKGIIK_16625	0.51	-3.0
3,651,461	+		OKGIIK_16625	0.60	-1.8
3,651,461	+		OKGIIK_16625	0.60	-2.3
3,651,461	+		OKGIIK_16625	0.60	-2.9
3,651,462	-		OKGIIK_16625	0.60	-0.5
3,651,462	-		OKGIIK_16625	0.60	-0.3
3,651,462	-		OKGIIK_16625	0.60	-2.8
3,651,491	+		OKGIIK_16625	0.64	-1.8
3,651,491	+		OKGIIK_16625	0.64	-0.8
3,651,492	-		OKGIIK_16625	0.64	-1.5
3,651,653	+		OKGIIK_16625	0.86	-0.7
3,651,653	+		OKGIIK_16625	0.86	-2.2
3,651,653	+		OKGIIK_16625	0.86	-2.2
3,651,653	+		OKGIIK_16625	0.86	-2.0
3,651,653	+		OKGIIK_16625	0.86	-4.2
3,651,653	+		OKGIIK_16625	0.86	-2.1
3,651,653	+		OKGIIK_16625	0.86	-2.8
3,651,653	+		OKGIIK_16625	0.86	-1.5
3,651,654	-		OKGIIK_16625	0.86	-3.3
3,651,654	-		OKGIIK_16625	0.86	-0.1
3,651,654	-		OKGIIK_16625	0.86	-1.1
3,651,654	-		OKGIIK_16625	0.86	-2.9
3,651,654	-		OKGIIK_16625	0.86	-2.3
3,651,654	-		OKGIIK_16625	0.86	-1.3
3,651,654	-		OKGIIK_16625	0.86	-1.8
3,651,654	-		OKGIIK_16625	0.86	-1.4
3,651,743	+				-0.8
3,651,743	+				+0.0
3,651,743	+				-2.1
3,651,743	+				-1.5
3,651,743	+				+0.0
3,651,743	+				-1.0
3,651,743	+				+0.0
3,651,743	+				-2.5
3,651,743	+				-1.5
3,651,743	+				+0.3
3,651,743	+				-2.1
3,651,744	-				-0.5
3,651,744	-				-0.2
3,651,744	-				-1.3
3,651,744	-				-0.8
3,651,744	-				+0.3
3,651,744	-				+1.0
3,651,744	-				-1.5
3,651,744	-				-0.3
3,651,744	-				+0.0
3,651,744	-				-1.0
3,651,744	-				-1.0
3,651,744	-				-3.6
3,651,744	-				-1.4
3,651,744	-				+0.5
3,651,833	+				-0.5
3,651,833	+				-1.3
3,651,833	+				+0.0
3,651,833	+				+0.7
3,651,833	+				+0.3
3,651,833	+				-0.3
3,651,833	+				-1.1
3,651,833	+				+1.0
3,651,833	+				+1.3
3,651,833	+				-1.3
3,651,833	+				-0.5
3,651,833	+				+1.5
3,651,833	+				-1.0
3,651,834	-				+0.0
3,651,834	-				+0.1
3,651,834	-				+1.8
3,651,834	-				+1.0
3,651,834	-				+1.6
3,651,834	-				-1.8
3,651,834	-				-0.8
3,651,834	-				-2.0
3,651,834	-				+1.5
3,651,834	-				-1.9
3,651,834	-				-1.3
3,651,834	-				+0.5
3,651,834	-				+0.2
3,651,834	-				-0.5
3,651,834	-				-1.0
3,651,834	-				+1.2
3,651,834	-				+0.0
3,651,834	-				+1.4
3,651,834	-				-0.7
3,651,834	-				-1.3
3,651,863	+				-2.1
3,651,863	+				-0.3
3,651,863	+				+0.0
3,651,863	+				-1.4
3,651,863	+				+0.3
3,651,864	-				-0.0
3,651,864	-				-0.3
3,651,864	-				+0.6
3,651,864	-				+1.0
3,651,864	-				+0.2
3,651,864	-				-0.8
3,651,864	-				-0.5
3,651,864	-				+0.5
3,651,938	+				-0.5
3,651,939	-				+1.3
3,651,996	+				+0.1
3,651,996	+				-0.8
3,651,997	-				+0.3
3,652,010	+				+2.9
3,652,010	+				+1.0
3,652,010	+				+1.0
3,652,011	-				+0.3
3,652,011	-				+0.6
3,652,011	-				+0.5
3,652,011	-				-0.2
3,652,022	+				-1.0
3,652,022	+				-1.5
3,652,022	+				-2.1
3,652,022	+				-2.1
3,652,022	+				+0.2
3,652,022	+				-0.3
3,652,022	+				+0.5
3,652,022	+				+1.0
3,652,023	-				+0.0
3,652,023	-				-0.3
3,652,023	-				+0.6
3,652,023	-				-1.6
3,652,023	-				-0.3
3,652,023	-				-0.7
3,652,023	-				+1.6
3,652,023	-				+0.0
3,652,023	-				-1.8
3,652,023	-				-0.3
3,652,023	-				+0.5
3,652,042	+				-2.0
3,652,042	+				+1.0
3,652,042	+				-3.0
3,652,042	+				+0.7
3,652,042	+				-0.5
3,652,042	+				-1.8
3,652,043	-				+0.4
3,652,043	-				-0.5
3,652,043	-				+1.0
3,652,043	-				-0.5
3,652,043	-				+0.0
3,652,043	-				+0.6
3,652,043	-				-0.1
3,652,043	-				-1.3
3,652,043	-				+0.2
3,652,060	+				+0.0
3,652,060	+				-0.1
3,652,060	+				-1.9
3,652,060	+				-0.4
3,652,060	+				-0.4
3,652,060	+				-1.5
3,652,060	+				-2.7
3,652,060	+				+0.0
3,652,061	-				-0.4
3,652,061	-				-1.1
3,652,061	-				-0.3
3,652,061	-				-0.4
3,652,061	-				-0.3
3,652,061	-				+0.0
3,652,106	+		OKGIIK_16630	0.18	-1.3
3,652,107	-		OKGIIK_16630	0.19	-0.5
3,652,107	-		OKGIIK_16630	0.19	+1.0
3,652,107	-		OKGIIK_16630	0.19	-0.4
3,652,107	-		OKGIIK_16630	0.19	+0.6
3,652,190	+		OKGIIK_16630	0.43	-0.5
3,652,190	+		OKGIIK_16630	0.43	+0.1
3,652,190	+		OKGIIK_16630	0.43	-1.3
3,652,190	+		OKGIIK_16630	0.43	+0.0
3,652,190	+		OKGIIK_16630	0.43	-2.1
3,652,190	+		OKGIIK_16630	0.43	+0.3
3,652,190	+		OKGIIK_16630	0.43	-2.5
3,652,190	+		OKGIIK_16630	0.43	-2.0
3,652,190	+		OKGIIK_16630	0.43	-2.9
3,652,190	+		OKGIIK_16630	0.43	+0.4
3,652,190	+		OKGIIK_16630	0.43	-1.8
3,652,190	+		OKGIIK_16630	0.43	-0.7
3,652,191	-		OKGIIK_16630	0.43	-1.0
3,652,191	-		OKGIIK_16630	0.43	-0.3
3,652,191	-		OKGIIK_16630	0.43	-1.3
3,652,191	-		OKGIIK_16630	0.43	-0.6
3,652,191	-		OKGIIK_16630	0.43	-1.0
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3,652,342	+		OKGIIK_16630	0.87	-1.9
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3,652,539	-		OKGIIK_16635	0.12	+0.0
3,652,608	+		OKGIIK_16635	0.19	+1.0
3,652,609	-		OKGIIK_16635	0.19	-0.2