Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_15205

Experiment: NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
3,309,163	+		OKGIIK_15200	0.79	-1.5
3,309,164	-		OKGIIK_15200	0.79	-3.5
3,309,496	+		OKGIIK_15200	0.86	-1.3
3,309,496	+		OKGIIK_15200	0.86	-4.1
3,309,496	+		OKGIIK_15200	0.86	-3.3
3,309,496	+		OKGIIK_15200	0.86	-0.9
3,309,496	+		OKGIIK_15200	0.86	-2.4
3,309,496	+		OKGIIK_15200	0.86	-1.9
3,309,496	+		OKGIIK_15200	0.86	-2.6
3,309,496	+		OKGIIK_15200	0.86	-1.5
3,309,497	-		OKGIIK_15200	0.87	-1.5
3,309,497	-		OKGIIK_15200	0.87	-0.9
3,309,497	-		OKGIIK_15200	0.87	-1.5
3,309,497	-		OKGIIK_15200	0.87	+1.1
3,309,497	-		OKGIIK_15200	0.87	-2.5
3,309,497	-		OKGIIK_15200	0.87	-2.4
3,309,497	-		OKGIIK_15200	0.87	-1.8
3,309,497	-		OKGIIK_15200	0.87	-2.9
3,309,497	-		OKGIIK_15200	0.87	-0.9
3,309,497	-		OKGIIK_15200	0.87	-0.5
3,309,497	-		OKGIIK_15200	0.87	-3.6
3,309,497	-		OKGIIK_15200	0.87	-0.5
3,309,497	-		OKGIIK_15200	0.87	-0.9
3,309,598	+		OKGIIK_15200	0.89	-2.3
3,309,598	+		OKGIIK_15200	0.89	-2.3
3,309,599	-		OKGIIK_15200	0.89	-2.6
3,309,599	-		OKGIIK_15200	0.89	-3.0
3,309,599	-		OKGIIK_15200	0.89	-0.9
3,309,599	-		OKGIIK_15200	0.89	-1.5
3,309,599	-		OKGIIK_15200	0.89	-2.6
3,309,622	+		OKGIIK_15200	0.89	-1.9
3,309,622	+		OKGIIK_15200	0.89	-1.8
3,309,622	+		OKGIIK_15200	0.89	-0.3
3,309,622	+		OKGIIK_15200	0.89	-2.5
3,309,622	+		OKGIIK_15200	0.89	+0.1
3,309,623	-		OKGIIK_15200	0.89	-1.5
3,309,623	-		OKGIIK_15200	0.89	-0.5
3,309,623	-		OKGIIK_15200	0.89	-3.3
3,309,623	-		OKGIIK_15200	0.89	-2.9
3,309,623	-		OKGIIK_15200	0.89	-2.3
3,309,623	-		OKGIIK_15200	0.89	-1.8
3,309,712	+				-1.3
3,309,712	+				-1.1
3,309,712	+				-1.3
3,309,712	+				-0.5
3,309,712	+				-0.5
3,309,712	+				-1.8
3,309,712	+				-1.8
3,309,712	+				-3.7
3,309,712	+				+0.3
3,309,712	+				-0.9
3,309,712	+				-1.5
3,309,712	+				-1.8
3,309,712	+				-3.3
3,309,712	+				-2.6
3,309,712	+				-1.5
3,309,712	+				-2.1
3,309,712	+				-0.9
3,309,712	+				-0.5
3,309,712	+				-1.5
3,309,713	-				-4.0
3,309,713	-				-0.5
3,309,713	-				-1.9
3,309,713	-				-4.3
3,309,713	-				-1.8
3,309,713	-				-2.8
3,309,713	-				-0.5
3,309,713	-				-2.1
3,309,713	-				-1.8
3,309,713	-				-1.3
3,309,713	-				-1.7
3,309,713	-				-1.1
3,309,713	-				-0.5
3,309,713	-				-2.3
3,309,713	-				-0.7
3,309,713	-				-2.4
3,309,713	-				+0.1
3,309,790	+				-2.1
3,309,790	+				-1.3
3,309,790	+				-1.8
3,309,790	+				-1.3
3,309,790	+				-1.3
3,309,790	+				-3.6
3,309,790	+				-4.2
3,309,790	+				-1.8
3,309,790	+				-0.9
3,309,790	+				-0.9
3,309,790	+				-1.5
3,309,790	+				-1.4
3,309,790	+				-3.5
3,309,790	+				-2.5
3,309,791	-				-2.1
3,309,791	-				-2.4
3,309,791	-				-2.1
3,309,791	-				-2.9
3,309,791	-				-2.3
3,309,791	-				-1.3
3,309,791	-				-0.4
3,309,791	-				-1.5
3,309,791	-				+0.3
3,309,791	-				+0.1
3,309,796	+				+0.5
3,309,796	+				-0.9
3,309,796	+				-0.9
3,309,796	+				-2.5
3,309,796	+				-1.6
3,309,796	+				-2.8
3,309,796	+				+1.6
3,309,797	-				-0.9
3,309,797	-				-2.3
3,309,797	-				-3.3
3,309,797	-				-1.3
3,309,797	-				+0.1
3,309,797	-				-0.8
3,309,797	-				-1.8
3,309,797	-				-0.9
3,309,979	+				-1.3
3,309,979	+				-1.8
3,310,063	+				-0.7
3,310,063	+				-2.3
3,310,063	+				-2.5
3,310,063	+				-1.8
3,310,063	+				-1.3
3,310,063	+				-2.1
3,310,063	+				+1.1
3,310,063	+				-0.9
3,310,063	+				-1.9
3,310,063	+				+1.4
3,310,064	-				-1.4
3,310,064	-				-3.6
3,310,064	-				-1.3
3,310,064	-				-0.9
3,310,064	-				-1.7
3,310,064	-				-1.5
3,310,064	-				-1.9
3,310,064	-				-3.5
3,310,064	-				-2.3
3,310,064	-				-4.2
3,310,064	-				-1.3
3,310,179	+				-4.5
3,310,180	-				-1.9
3,310,365	+		OKGIIK_15205	0.15	-1.5
3,310,365	+		OKGIIK_15205	0.15	-1.3
3,310,365	+		OKGIIK_15205	0.15	-2.1
3,310,365	+		OKGIIK_15205	0.15	-1.9
3,310,366	-		OKGIIK_15205	0.15	-1.3
3,310,366	-		OKGIIK_15205	0.15	-1.5
3,310,366	-		OKGIIK_15205	0.15	-1.5
3,310,663	+		OKGIIK_15205	0.35	+0.1
3,310,663	+		OKGIIK_15205	0.35	-1.3
3,310,663	+		OKGIIK_15205	0.35	-1.9
3,310,663	+		OKGIIK_15205	0.35	-1.6
3,310,663	+		OKGIIK_15205	0.35	-3.4
3,310,664	-		OKGIIK_15205	0.35	-1.9
3,310,664	-		OKGIIK_15205	0.35	+1.1
3,310,664	-		OKGIIK_15205	0.35	-1.9
3,310,664	-		OKGIIK_15205	0.35	-2.5
3,310,664	-		OKGIIK_15205	0.35	-0.1
3,311,170	-		OKGIIK_15205	0.70	-0.9
3,311,454	-		OKGIIK_15205	0.89	-0.5
3,311,848	+				-1.3
3,311,848	+				-0.8
3,311,848	+				-1.3
3,311,848	+				-0.4
3,311,848	+				-0.9
3,311,849	-				-0.3
3,311,849	-				-0.1
3,311,849	-				-0.9
3,311,849	-				-0.3
3,311,849	-				+0.8
3,311,849	-				+0.3
3,311,849	-				-0.5
3,311,855	+				+1.1
3,311,855	+				-1.5
3,311,855	+				-1.3
3,311,855	+				-2.1
3,311,855	+				+0.4
3,311,855	+				-0.5
3,311,856	-				+0.1
3,311,856	-				+0.5
3,311,856	-				-0.8
3,311,856	-				+1.1
3,311,856	-				+1.1
3,312,280	+	ompR	OKGIIK_15210	0.19	+0.2
3,312,280	+	ompR	OKGIIK_15210	0.19	-0.5
3,312,281	-	ompR	OKGIIK_15210	0.19	-0.5
3,312,281	-	ompR	OKGIIK_15210	0.19	-0.8
3,312,281	-	ompR	OKGIIK_15210	0.19	+0.6
3,312,281	-	ompR	OKGIIK_15210	0.19	-0.9
3,312,342	+	ompR	OKGIIK_15210	0.20	-1.3
3,312,342	+	ompR	OKGIIK_15210	0.20	-2.6
3,312,342	+	ompR	OKGIIK_15210	0.20	-0.2
3,312,342	+	ompR	OKGIIK_15210	0.20	-1.9
3,312,342	+	ompR	OKGIIK_15210	0.20	-2.1
3,312,342	+	ompR	OKGIIK_15210	0.20	+0.5
3,312,342	+	ompR	OKGIIK_15210	0.20	+0.9
3,312,342	+	ompR	OKGIIK_15210	0.20	+1.8
3,312,342	+	ompR	OKGIIK_15210	0.20	+0.1
3,312,342	+	ompR	OKGIIK_15210	0.20	+0.1
3,312,343	-	ompR	OKGIIK_15210	0.21	-1.4
3,312,343	-	ompR	OKGIIK_15210	0.21	-0.6
3,312,343	-	ompR	OKGIIK_15210	0.21	-0.4
3,312,343	-	ompR	OKGIIK_15210	0.21	-0.5
3,312,343	-	ompR	OKGIIK_15210	0.21	-1.4
3,312,343	-	ompR	OKGIIK_15210	0.21	-0.9
3,312,343	-	ompR	OKGIIK_15210	0.21	-3.3
3,312,344	+	ompR	OKGIIK_15210	0.21	-1.7
3,312,344	+	ompR	OKGIIK_15210	0.21	+0.9
3,312,344	+	ompR	OKGIIK_15210	0.21	-0.3
3,312,344	+	ompR	OKGIIK_15210	0.21	+1.1
3,312,344	+	ompR	OKGIIK_15210	0.21	+0.5
3,312,345	-	ompR	OKGIIK_15210	0.21	-1.3
3,312,345	-	ompR	OKGIIK_15210	0.21	-0.3
3,312,345	-	ompR	OKGIIK_15210	0.21	+1.1
3,312,345	-	ompR	OKGIIK_15210	0.21	-0.1
3,312,345	-	ompR	OKGIIK_15210	0.21	+2.1
3,312,345	-	ompR	OKGIIK_15210	0.21	-1.8
3,312,345	-	ompR	OKGIIK_15210	0.21	-2.5
3,312,345	-	ompR	OKGIIK_15210	0.21	-0.2
3,312,527	+	ompR	OKGIIK_15210	0.26	-0.9
3,312,527	+	ompR	OKGIIK_15210	0.26	-0.5
3,312,527	+	ompR	OKGIIK_15210	0.26	+1.1
3,312,527	+	ompR	OKGIIK_15210	0.26	-1.5
3,312,527	+	ompR	OKGIIK_15210	0.26	-0.4
3,312,527	+	ompR	OKGIIK_15210	0.26	-1.8
3,312,527	+	ompR	OKGIIK_15210	0.26	+0.8
3,312,527	+	ompR	OKGIIK_15210	0.26	-1.2
3,312,527	+	ompR	OKGIIK_15210	0.26	-0.9
3,312,527	+	ompR	OKGIIK_15210	0.26	-1.5
3,312,527	+	ompR	OKGIIK_15210	0.26	-0.1
3,312,527	+	ompR	OKGIIK_15210	0.26	-0.9
3,312,527	+	ompR	OKGIIK_15210	0.26	+0.6
3,312,527	+	ompR	OKGIIK_15210	0.26	-0.3
3,312,527	+	ompR	OKGIIK_15210	0.26	+1.5
3,312,528	-	ompR	OKGIIK_15210	0.26	+0.1
3,312,528	-	ompR	OKGIIK_15210	0.26	+0.1
3,312,528	-	ompR	OKGIIK_15210	0.26	+1.2
3,312,528	-	ompR	OKGIIK_15210	0.26	+0.7
3,312,528	-	ompR	OKGIIK_15210	0.26	-2.3
3,312,528	-	ompR	OKGIIK_15210	0.26	-0.8
3,312,528	-	ompR	OKGIIK_15210	0.26	+1.1
3,312,528	-	ompR	OKGIIK_15210	0.26	+0.2
3,312,528	-	ompR	OKGIIK_15210	0.26	-1.5