Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14005

Experiment: NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
3,042,154	+		OKGIIK_14000	0.59	+1.0
3,042,154	+		OKGIIK_14000	0.59	-1.0
3,042,154	+		OKGIIK_14000	0.59	-0.5
3,042,155	-		OKGIIK_14000	0.59	+1.1
3,042,155	-		OKGIIK_14000	0.59	-1.3
3,042,155	-		OKGIIK_14000	0.59	+1.6
3,042,155	-		OKGIIK_14000	0.59	+2.4
3,042,155	-		OKGIIK_14000	0.59	+0.3
3,042,155	-		OKGIIK_14000	0.59	+0.2
3,042,192	+		OKGIIK_14000	0.61	-0.6
3,042,192	+		OKGIIK_14000	0.61	+0.3
3,042,193	-		OKGIIK_14000	0.61	-0.1
3,042,220	+		OKGIIK_14000	0.62	-1.1
3,042,220	+		OKGIIK_14000	0.62	+1.0
3,042,221	-		OKGIIK_14000	0.62	-0.4
3,042,221	-		OKGIIK_14000	0.62	+1.3
3,042,222	+		OKGIIK_14000	0.62	-0.7
3,042,222	+		OKGIIK_14000	0.62	+0.8
3,042,223	-		OKGIIK_14000	0.62	+0.0
3,042,252	+		OKGIIK_14000	0.64	-0.3
3,042,252	+		OKGIIK_14000	0.64	-0.7
3,042,253	-		OKGIIK_14000	0.64	+0.0
3,042,285	+		OKGIIK_14000	0.65	-0.4
3,042,285	+		OKGIIK_14000	0.65	+0.6
3,042,285	+		OKGIIK_14000	0.65	+0.5
3,042,285	+		OKGIIK_14000	0.65	-0.5
3,042,286	-		OKGIIK_14000	0.65	+1.0
3,042,286	-		OKGIIK_14000	0.65	-0.5
3,042,286	-		OKGIIK_14000	0.65	-0.4
3,042,286	-		OKGIIK_14000	0.65	+1.0
3,042,286	-		OKGIIK_14000	0.65	-0.6
3,042,312	+		OKGIIK_14000	0.66	-2.9
3,042,313	-		OKGIIK_14000	0.66	+1.6
3,042,313	-		OKGIIK_14000	0.66	+1.0
3,042,313	-		OKGIIK_14000	0.66	+1.0
3,042,347	-		OKGIIK_14000	0.68	+1.0
3,042,447	+		OKGIIK_14000	0.72	-0.7
3,042,447	+		OKGIIK_14000	0.72	-1.0
3,042,448	-		OKGIIK_14000	0.72	-1.4
3,042,448	-		OKGIIK_14000	0.72	-0.1
3,042,448	-		OKGIIK_14000	0.72	+1.0
3,042,512	+		OKGIIK_14000	0.75	-0.7
3,042,513	-		OKGIIK_14000	0.75	-1.0
3,042,513	-		OKGIIK_14000	0.75	-1.0
3,042,513	-		OKGIIK_14000	0.75	-0.4
3,042,513	-		OKGIIK_14000	0.75	+0.0
3,042,513	-		OKGIIK_14000	0.75	+0.2
3,042,553	+		OKGIIK_14000	0.77	-0.5
3,042,575	+		OKGIIK_14000	0.78	-1.6
3,042,575	+		OKGIIK_14000	0.78	-1.8
3,042,575	+		OKGIIK_14000	0.78	+0.0
3,042,575	+		OKGIIK_14000	0.78	+1.4
3,042,575	+		OKGIIK_14000	0.78	-0.6
3,042,575	+		OKGIIK_14000	0.78	-1.0
3,042,576	-		OKGIIK_14000	0.78	-0.9
3,042,576	-		OKGIIK_14000	0.78	-1.0
3,042,617	+		OKGIIK_14000	0.80	+0.0
3,042,618	-		OKGIIK_14000	0.80	+0.1
3,042,657	-		OKGIIK_14000	0.81	-1.0
3,042,657	-		OKGIIK_14000	0.81	+0.7
3,042,692	+		OKGIIK_14000	0.83	+1.3
3,042,692	+		OKGIIK_14000	0.83	+1.0
3,042,692	+		OKGIIK_14000	0.83	+1.2
3,042,740	+		OKGIIK_14000	0.85	-0.6
3,042,740	+		OKGIIK_14000	0.85	+0.5
3,042,740	+		OKGIIK_14000	0.85	-0.2
3,042,740	+		OKGIIK_14000	0.85	-1.6
3,042,740	+		OKGIIK_14000	0.85	+0.7
3,042,740	+		OKGIIK_14000	0.85	-0.6
3,042,740	+		OKGIIK_14000	0.85	+0.9
3,042,740	+		OKGIIK_14000	0.85	+1.0
3,042,740	+		OKGIIK_14000	0.85	-2.5
3,042,740	+		OKGIIK_14000	0.85	-1.1
3,042,740	+		OKGIIK_14000	0.85	-1.0
3,042,741	-		OKGIIK_14000	0.85	+0.7
3,042,741	-		OKGIIK_14000	0.85	-0.3
3,042,741	-		OKGIIK_14000	0.85	+0.8
3,042,741	-		OKGIIK_14000	0.85	+2.4
3,042,741	-		OKGIIK_14000	0.85	+1.0
3,042,741	-		OKGIIK_14000	0.85	+0.0
3,042,741	-		OKGIIK_14000	0.85	-0.6
3,042,741	-		OKGIIK_14000	0.85	-0.4
3,042,741	-		OKGIIK_14000	0.85	+0.6
3,043,152	+				+1.0
3,043,175	+				-1.0
3,043,175	+				+1.6
3,043,175	+				+0.0
3,043,176	-				-1.3
3,043,176	-				-0.2
3,043,176	-				+2.0
3,043,208	+				-0.1
3,043,209	-				-0.9
3,043,209	-				-1.5
3,043,209	-				+2.7
3,043,209	-				-0.2
3,043,209	-				-1.0
3,043,209	-				+2.6
3,043,209	-				-1.2
3,043,337	+				-2.7
3,043,337	+				-0.7
3,043,338	-				-0.3
3,043,338	-				-1.8
3,043,338	-				-1.6
3,043,338	-				+1.0
3,043,472	+		OKGIIK_14005	0.15	+1.8
3,043,497	-		OKGIIK_14005	0.16	+0.5
3,043,530	+		OKGIIK_14005	0.17	+0.0
3,043,530	+		OKGIIK_14005	0.17	+0.2
3,043,530	+		OKGIIK_14005	0.17	-1.6
3,043,530	+		OKGIIK_14005	0.17	+0.2
3,043,530	+		OKGIIK_14005	0.17	+0.0
3,043,530	+		OKGIIK_14005	0.17	+0.0
3,043,530	+		OKGIIK_14005	0.17	-1.5
3,043,531	-		OKGIIK_14005	0.18	-1.3
3,043,531	-		OKGIIK_14005	0.18	-1.0
3,043,531	-		OKGIIK_14005	0.18	+1.0
3,043,532	+		OKGIIK_14005	0.18	+0.0
3,043,532	+		OKGIIK_14005	0.18	+1.0
3,043,532	+		OKGIIK_14005	0.18	+0.0
3,043,533	-		OKGIIK_14005	0.18	-1.0
3,043,533	-		OKGIIK_14005	0.18	-0.9
3,043,533	-		OKGIIK_14005	0.18	+0.2
3,043,604	+		OKGIIK_14005	0.20	+1.0
3,043,605	-		OKGIIK_14005	0.20	-1.2
3,043,734	-		OKGIIK_14005	0.26	+0.5
3,043,778	+		OKGIIK_14005	0.27	-1.6
3,043,778	+		OKGIIK_14005	0.27	+0.1
3,043,779	-		OKGIIK_14005	0.27	-0.9
3,043,779	-		OKGIIK_14005	0.27	+0.0
3,043,779	-		OKGIIK_14005	0.27	-0.3
3,043,779	-		OKGIIK_14005	0.27	-2.0
3,043,857	+		OKGIIK_14005	0.30	+1.6
3,043,857	+		OKGIIK_14005	0.30	-2.3
3,043,857	+		OKGIIK_14005	0.30	-1.6
3,043,857	+		OKGIIK_14005	0.30	+0.0
3,043,857	+		OKGIIK_14005	0.30	-0.3
3,043,858	-		OKGIIK_14005	0.30	+2.9
3,043,858	-		OKGIIK_14005	0.30	+0.4
3,043,887	+		OKGIIK_14005	0.32	+1.0
3,043,887	+		OKGIIK_14005	0.32	-3.1
3,043,887	+		OKGIIK_14005	0.32	-1.3
3,043,887	+		OKGIIK_14005	0.32	-0.6
3,043,907	+		OKGIIK_14005	0.32	+0.4
3,043,907	+		OKGIIK_14005	0.32	-0.5
3,043,908	-		OKGIIK_14005	0.32	+0.0
3,043,908	-		OKGIIK_14005	0.32	-1.2
3,043,908	-		OKGIIK_14005	0.32	-0.6
3,043,963	+		OKGIIK_14005	0.35	+1.3
3,043,964	-		OKGIIK_14005	0.35	-2.0
3,043,973	+		OKGIIK_14005	0.35	-1.0
3,043,973	+		OKGIIK_14005	0.35	-0.3
3,043,973	+		OKGIIK_14005	0.35	+1.0
3,043,973	+		OKGIIK_14005	0.35	+1.4
3,043,974	-		OKGIIK_14005	0.35	-1.6
3,043,974	-		OKGIIK_14005	0.35	-0.5
3,043,974	-		OKGIIK_14005	0.35	-2.0
3,044,123	+		OKGIIK_14005	0.41	-0.9
3,044,123	+		OKGIIK_14005	0.41	-1.3
3,044,124	-		OKGIIK_14005	0.41	+2.0
3,044,124	-		OKGIIK_14005	0.41	+0.4
3,044,124	-		OKGIIK_14005	0.41	-0.5
3,044,124	-		OKGIIK_14005	0.41	+1.0
3,044,226	-		OKGIIK_14005	0.45	-0.6
3,044,285	+		OKGIIK_14005	0.47	+1.6
3,044,404	-		OKGIIK_14005	0.52	-0.4
3,044,492	+		OKGIIK_14005	0.56	-1.2
3,044,492	+		OKGIIK_14005	0.56	-0.8
3,044,492	+		OKGIIK_14005	0.56	+0.0
3,044,575	+		OKGIIK_14005	0.59	-1.3
3,044,575	+		OKGIIK_14005	0.59	-1.5
3,044,575	+		OKGIIK_14005	0.59	-1.6
3,044,576	-		OKGIIK_14005	0.59	-1.6
3,044,576	-		OKGIIK_14005	0.59	-0.3
3,044,576	-		OKGIIK_14005	0.59	-0.6
3,044,644	+		OKGIIK_14005	0.62	-0.2
3,044,644	+		OKGIIK_14005	0.62	-1.3
3,044,644	+		OKGIIK_14005	0.62	-1.0
3,044,644	+		OKGIIK_14005	0.62	+0.0
3,044,645	-		OKGIIK_14005	0.62	-1.6
3,044,645	-		OKGIIK_14005	0.62	-0.3
3,044,645	-		OKGIIK_14005	0.62	-0.1
3,044,645	-		OKGIIK_14005	0.62	+1.0
3,044,645	-		OKGIIK_14005	0.62	-0.4
3,044,645	-		OKGIIK_14005	0.62	+1.0
3,044,736	-		OKGIIK_14005	0.65	-0.3
3,044,766	-		OKGIIK_14005	0.66	-0.5
3,044,766	-		OKGIIK_14005	0.66	+0.0
3,044,784	+		OKGIIK_14005	0.67	+0.9
3,044,784	+		OKGIIK_14005	0.67	-0.2
3,044,784	+		OKGIIK_14005	0.67	+2.0
3,044,785	-		OKGIIK_14005	0.67	+0.0
3,044,785	-		OKGIIK_14005	0.67	+1.6
3,044,785	-		OKGIIK_14005	0.67	+0.3
3,044,785	-		OKGIIK_14005	0.67	+0.7
3,044,785	-		OKGIIK_14005	0.67	-0.8
3,044,785	-		OKGIIK_14005	0.67	+0.3
3,044,801	+		OKGIIK_14005	0.68	-1.0
3,044,801	+		OKGIIK_14005	0.68	-1.8
3,044,802	-		OKGIIK_14005	0.68	-0.2
3,044,804	-		OKGIIK_14005	0.68	-3.2
3,044,859	+		OKGIIK_14005	0.70	-1.9
3,044,859	+		OKGIIK_14005	0.70	+0.1
3,044,859	+		OKGIIK_14005	0.70	-1.0
3,044,860	-		OKGIIK_14005	0.70	-1.0
3,044,861	+		OKGIIK_14005	0.70	-0.2
3,044,861	+		OKGIIK_14005	0.70	-0.8
3,044,861	+		OKGIIK_14005	0.70	-0.3
3,044,862	-		OKGIIK_14005	0.70	-0.7
3,044,888	+		OKGIIK_14005	0.71	-2.2
3,044,888	+		OKGIIK_14005	0.71	+2.8
3,044,889	-		OKGIIK_14005	0.71	-0.3
3,045,107	+		OKGIIK_14005	0.80	-0.1
3,045,107	+		OKGIIK_14005	0.80	+1.0
3,045,108	-		OKGIIK_14005	0.80	+1.0
3,045,108	-		OKGIIK_14005	0.80	-0.3
3,045,127	+		OKGIIK_14005	0.81	+0.4
3,045,127	+		OKGIIK_14005	0.81	-1.6
3,045,127	+		OKGIIK_14005	0.81	-1.8
3,045,158	-		OKGIIK_14005	0.82	-2.6
3,045,158	-		OKGIIK_14005	0.82	+0.0
3,045,159	+		OKGIIK_14005	0.82	+1.0
3,045,159	+		OKGIIK_14005	0.82	-2.0
3,045,160	-		OKGIIK_14005	0.82	-0.4
3,045,160	-		OKGIIK_14005	0.82	+0.6
3,045,253	-		OKGIIK_14005	0.86	-2.2
3,045,253	-		OKGIIK_14005	0.86	+0.0
3,045,317	+		OKGIIK_14005	0.88	-0.5
3,045,318	-		OKGIIK_14005	0.88	-0.2
3,045,318	-		OKGIIK_14005	0.88	+1.0
3,045,318	-		OKGIIK_14005	0.88	-0.1
3,045,401	+				+1.0
3,045,401	+				+1.4
3,045,401	+				+0.8
3,045,401	+				+1.5
3,045,401	+				-1.4
3,045,402	-				-0.5
3,045,488	+				+0.3
3,045,489	-				+1.2
3,045,489	-				-1.0
3,045,571	+				+0.0
3,045,571	+				+0.1
3,045,572	-				-0.5
3,045,572	-				+0.4
3,045,572	-				-0.3
3,045,572	-				+1.0
3,045,572	-				-1.0
3,045,584	+				+0.7
3,045,584	+				+1.4
3,045,584	+				-0.6
3,045,584	+				-1.6
3,045,585	-				+1.1
3,045,585	-				-0.8
3,045,648	+				+1.0
3,045,649	-				+1.1
3,045,649	-				-0.4
3,045,649	-				+1.5
3,045,689	-				+1.0
3,045,704	-				-0.6
3,045,810	+		OKGIIK_14010	0.14	-1.2
3,045,810	+		OKGIIK_14010	0.14	+1.0
3,045,810	+		OKGIIK_14010	0.14	+2.9
3,045,810	+		OKGIIK_14010	0.14	-1.0
3,045,810	+		OKGIIK_14010	0.14	-0.6
3,045,810	+		OKGIIK_14010	0.14	-0.8
3,045,810	+		OKGIIK_14010	0.14	+0.3
3,045,810	+		OKGIIK_14010	0.14	+1.0
3,045,810	+		OKGIIK_14010	0.14	-0.8
3,045,811	-		OKGIIK_14010	0.15	-0.8
3,045,811	-		OKGIIK_14010	0.15	+2.0
3,045,811	-		OKGIIK_14010	0.15	+0.8
3,045,811	-		OKGIIK_14010	0.15	-1.0
3,045,811	-		OKGIIK_14010	0.15	+1.3
3,046,060	-		OKGIIK_14010	0.34	+0.2
3,046,109	-		OKGIIK_14010	0.37	-0.2
3,046,207	+		OKGIIK_14010	0.45	-0.2
3,046,207	+		OKGIIK_14010	0.45	+0.3
3,046,345	+		OKGIIK_14010	0.55	+0.6
3,046,346	-		OKGIIK_14010	0.56	-0.4
3,046,356	+		OKGIIK_14010	0.56	-1.2
3,046,356	+		OKGIIK_14010	0.56	+0.5
3,046,357	-		OKGIIK_14010	0.56	-2.2
3,046,357	-		OKGIIK_14010	0.56	-1.8
3,046,387	+		OKGIIK_14010	0.59	+0.7
3,046,387	+		OKGIIK_14010	0.59	+1.4
3,046,387	+		OKGIIK_14010	0.59	+3.0
3,046,388	-		OKGIIK_14010	0.59	+0.2
3,046,388	-		OKGIIK_14010	0.59	-0.2
3,046,472	+		OKGIIK_14010	0.65	+0.0
3,046,473	+		OKGIIK_14010	0.65	+1.0
3,046,474	-		OKGIIK_14010	0.65	+0.9
3,046,474	-		OKGIIK_14010	0.65	-2.1
3,046,474	-		OKGIIK_14010	0.65	-1.2
3,046,474	-		OKGIIK_14010	0.65	+2.8
3,046,542	+		OKGIIK_14010	0.71	+1.0
3,046,542	+		OKGIIK_14010	0.71	-1.7
3,046,542	+		OKGIIK_14010	0.71	+0.0
3,046,543	-		OKGIIK_14010	0.71	+0.6
3,046,543	-		OKGIIK_14010	0.71	+2.6