Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_12135

Experiment: NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
2,613,303	+	mlaD	OKGIIK_12125	0.85	-1.3
2,613,303	+	mlaD	OKGIIK_12125	0.85	-0.2
2,613,303	+	mlaD	OKGIIK_12125	0.85	+1.8
2,613,303	+	mlaD	OKGIIK_12125	0.85	-1.3
2,613,303	+	mlaD	OKGIIK_12125	0.85	-2.0
2,613,303	+	mlaD	OKGIIK_12125	0.85	+1.0
2,613,303	+	mlaD	OKGIIK_12125	0.85	-0.6
2,613,303	+	mlaD	OKGIIK_12125	0.85	-3.4
2,613,303	+	mlaD	OKGIIK_12125	0.85	-1.6
2,613,303	+	mlaD	OKGIIK_12125	0.85	-0.2
2,613,303	+	mlaD	OKGIIK_12125	0.85	-0.2
2,613,303	+	mlaD	OKGIIK_12125	0.85	-1.0
2,613,303	+	mlaD	OKGIIK_12125	0.85	+2.0
2,613,303	+	mlaD	OKGIIK_12125	0.85	-2.4
2,613,303	+	mlaD	OKGIIK_12125	0.85	+0.0
2,613,303	+	mlaD	OKGIIK_12125	0.85	+0.0
2,613,304	-	mlaD	OKGIIK_12125	0.85	-0.8
2,613,304	-	mlaD	OKGIIK_12125	0.85	-0.6
2,613,304	-	mlaD	OKGIIK_12125	0.85	-1.0
2,613,304	-	mlaD	OKGIIK_12125	0.85	-1.8
2,613,304	-	mlaD	OKGIIK_12125	0.85	+1.2
2,613,304	-	mlaD	OKGIIK_12125	0.85	-3.2
2,613,304	-	mlaD	OKGIIK_12125	0.85	-1.0
2,613,304	-	mlaD	OKGIIK_12125	0.85	+1.0
2,613,304	-	mlaD	OKGIIK_12125	0.85	-0.8
2,613,304	-	mlaD	OKGIIK_12125	0.85	-1.6
2,613,304	-	mlaD	OKGIIK_12125	0.85	-2.2
2,613,304	-	mlaD	OKGIIK_12125	0.85	+1.0
2,613,304	-	mlaD	OKGIIK_12125	0.85	-0.6
2,613,304	-	mlaD	OKGIIK_12125	0.85	+0.0
2,613,304	-	mlaD	OKGIIK_12125	0.85	-1.0
2,613,304	-	mlaD	OKGIIK_12125	0.85	-1.3
2,613,354	+				-1.8
2,613,354	+				-0.4
2,613,355	-				-0.6
2,613,355	-				-1.0
2,613,355	-				-1.6
2,613,355	-				+1.0
2,613,355	-				+1.0
2,613,355	-				-1.0
2,613,355	-				-2.0
2,613,355	-				-1.6
2,613,355	-				+0.0
2,613,405	+				-1.1
2,613,405	+				-1.6
2,613,406	-				-0.8
2,613,406	-				-2.4
2,613,406	-				-1.8
2,613,406	-				-0.2
2,613,555	+	mlaE	OKGIIK_12130	0.10	-3.0
2,613,555	+	mlaE	OKGIIK_12130	0.10	-1.3
2,613,555	+	mlaE	OKGIIK_12130	0.10	-1.3
2,613,555	+	mlaE	OKGIIK_12130	0.10	-1.6
2,613,555	+	mlaE	OKGIIK_12130	0.10	+0.4
2,613,556	-	mlaE	OKGIIK_12130	0.10	-1.0
2,613,556	-	mlaE	OKGIIK_12130	0.10	-2.6
2,613,831	+	mlaE	OKGIIK_12130	0.46	+1.0
2,613,831	+	mlaE	OKGIIK_12130	0.46	-1.3
2,613,832	-	mlaE	OKGIIK_12130	0.46	-0.6
2,613,832	-	mlaE	OKGIIK_12130	0.46	-0.6
2,613,969	+	mlaE	OKGIIK_12130	0.63	-2.0
2,613,969	+	mlaE	OKGIIK_12130	0.63	-1.0
2,614,032	+	mlaE	OKGIIK_12130	0.72	-1.3
2,614,032	+	mlaE	OKGIIK_12130	0.72	-1.8
2,614,032	+	mlaE	OKGIIK_12130	0.72	-0.9
2,614,033	-	mlaE	OKGIIK_12130	0.72	+0.3
2,614,033	-	mlaE	OKGIIK_12130	0.72	+0.0
2,614,033	-	mlaE	OKGIIK_12130	0.72	+0.0
2,614,137	+	mlaE	OKGIIK_12130	0.85	-1.0
2,614,137	+	mlaE	OKGIIK_12130	0.85	-1.8
2,614,137	+	mlaE	OKGIIK_12130	0.85	-1.3
2,614,137	+	mlaE	OKGIIK_12130	0.85	-1.6
2,614,138	-	mlaE	OKGIIK_12130	0.85	-1.0
2,614,138	-	mlaE	OKGIIK_12130	0.85	-1.3
2,614,138	-	mlaE	OKGIIK_12130	0.85	-0.3
2,614,138	-	mlaE	OKGIIK_12130	0.85	-2.2
2,614,244	+				+2.4
2,614,244	+				-2.2
2,614,244	+				-1.0
2,614,244	+				-1.2
2,614,245	-				+1.4
2,614,245	-				+0.3
2,614,245	-				-0.6
2,614,245	-				-0.1
2,614,245	-				+0.0
2,614,245	-				-1.6
2,614,245	-				+1.3
2,614,245	-				-1.3
2,614,286	+				-1.3
2,614,286	+				+0.7
2,614,286	+				-1.0
2,614,286	+				+0.2
2,614,287	-				+1.0
2,614,287	-				-0.9
2,614,465	+	mlaF	OKGIIK_12135	0.26	-1.0
2,614,466	-	mlaF	OKGIIK_12135	0.26	-0.6
2,614,565	+	mlaF	OKGIIK_12135	0.38	-2.8
2,614,565	+	mlaF	OKGIIK_12135	0.38	-3.4
2,614,565	+	mlaF	OKGIIK_12135	0.38	-1.0
2,614,566	-	mlaF	OKGIIK_12135	0.38	+1.0
2,614,681	+	mlaF	OKGIIK_12135	0.52	-1.0
2,614,681	+	mlaF	OKGIIK_12135	0.52	-0.8
2,614,681	+	mlaF	OKGIIK_12135	0.52	-2.3
2,614,681	+	mlaF	OKGIIK_12135	0.52	-0.1
2,614,681	+	mlaF	OKGIIK_12135	0.52	-1.6
2,614,681	+	mlaF	OKGIIK_12135	0.52	-2.2
2,614,681	+	mlaF	OKGIIK_12135	0.52	+0.0
2,614,682	-	mlaF	OKGIIK_12135	0.52	-1.6
2,614,682	-	mlaF	OKGIIK_12135	0.52	-1.2
2,614,682	-	mlaF	OKGIIK_12135	0.52	+0.4
2,614,682	-	mlaF	OKGIIK_12135	0.52	-2.0
2,614,682	-	mlaF	OKGIIK_12135	0.52	+0.3
2,614,682	-	mlaF	OKGIIK_12135	0.52	+0.0
2,614,682	-	mlaF	OKGIIK_12135	0.52	-1.6
2,614,682	-	mlaF	OKGIIK_12135	0.52	-0.3
2,614,682	-	mlaF	OKGIIK_12135	0.52	-3.2
2,614,682	-	mlaF	OKGIIK_12135	0.52	-1.3
2,614,682	-	mlaF	OKGIIK_12135	0.52	-0.3
2,614,802	+	mlaF	OKGIIK_12135	0.66	+0.0
2,614,802	+	mlaF	OKGIIK_12135	0.66	-0.6
2,614,803	-	mlaF	OKGIIK_12135	0.66	-2.2
2,614,803	-	mlaF	OKGIIK_12135	0.66	-2.2
2,614,803	-	mlaF	OKGIIK_12135	0.66	-1.2
2,614,803	-	mlaF	OKGIIK_12135	0.66	-1.0
2,614,826	+	mlaF	OKGIIK_12135	0.69	+1.0
2,614,826	+	mlaF	OKGIIK_12135	0.69	-1.8
2,614,826	+	mlaF	OKGIIK_12135	0.69	-0.3
2,614,826	+	mlaF	OKGIIK_12135	0.69	+0.0
2,614,826	+	mlaF	OKGIIK_12135	0.69	-1.8
2,614,826	+	mlaF	OKGIIK_12135	0.69	-2.0
2,614,826	+	mlaF	OKGIIK_12135	0.69	-1.7
2,614,826	+	mlaF	OKGIIK_12135	0.69	+1.5
2,614,826	+	mlaF	OKGIIK_12135	0.69	+0.0
2,614,826	+	mlaF	OKGIIK_12135	0.69	+1.0
2,614,826	+	mlaF	OKGIIK_12135	0.69	-1.2
2,614,826	+	mlaF	OKGIIK_12135	0.69	-0.3
2,614,826	+	mlaF	OKGIIK_12135	0.69	+0.5
2,614,826	+	mlaF	OKGIIK_12135	0.69	-0.6
2,614,826	+	mlaF	OKGIIK_12135	0.69	-2.3
2,614,826	+	mlaF	OKGIIK_12135	0.69	-0.6
2,614,826	+	mlaF	OKGIIK_12135	0.69	-0.9
2,614,826	+	mlaF	OKGIIK_12135	0.69	-1.6
2,614,826	+	mlaF	OKGIIK_12135	0.69	-2.3
2,614,826	+	mlaF	OKGIIK_12135	0.69	-2.0
2,614,827	-	mlaF	OKGIIK_12135	0.69	-0.6
2,614,827	-	mlaF	OKGIIK_12135	0.69	-2.0
2,614,827	-	mlaF	OKGIIK_12135	0.69	-2.6
2,614,827	-	mlaF	OKGIIK_12135	0.69	-1.6
2,614,827	-	mlaF	OKGIIK_12135	0.69	-0.6
2,614,827	-	mlaF	OKGIIK_12135	0.69	-1.3
2,614,827	-	mlaF	OKGIIK_12135	0.69	-0.6
2,614,827	-	mlaF	OKGIIK_12135	0.69	-1.3
2,614,827	-	mlaF	OKGIIK_12135	0.69	-2.6
2,614,827	-	mlaF	OKGIIK_12135	0.69	-2.2
2,614,827	-	mlaF	OKGIIK_12135	0.69	-0.6
2,614,827	-	mlaF	OKGIIK_12135	0.69	-2.8
2,615,118	+				+0.7
2,615,119	-				-0.4