Experiment: NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ftsL and rsmH overlap by 4 nucleotides rsmH and mraZ are separated by 42 nucleotides mraZ and rsmI are separated by 780 nucleotides
OKGIIK_11715: ftsL - cell division protein FtsL, at 2,522,751 to 2,523,020
ftsL
OKGIIK_11720: rsmH - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 2,523,017 to 2,523,958
rsmH
OKGIIK_11725: mraZ - division/cell wall cluster transcriptional repressor MraZ, at 2,524,001 to 2,524,447
mraZ
OKGIIK_11735: rsmI - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 2,525,228 to 2,526,064
rsmI
Position (kb)
2524
2525 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2524.003 kb on - strand at 2524.003 kb on - strand at 2524.003 kb on - strand at 2524.003 kb on - strand at 2524.003 kb on - strand at 2524.003 kb on - strand at 2524.003 kb on - strand at 2524.003 kb on - strand at 2524.003 kb on - strand at 2524.003 kb on - strand at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.465 kb on - strand at 2524.547 kb on - strand at 2524.547 kb on - strand at 2524.625 kb on - strand at 2524.625 kb on - strand at 2524.629 kb on - strand at 2524.629 kb on - strand at 2524.629 kb on - strand at 2524.629 kb on - strand at 2524.629 kb on - strand at 2524.629 kb on - strand at 2524.629 kb on - strand at 2524.629 kb on - strand at 2524.629 kb on - strand at 2525.150 kb on + strand at 2525.150 kb on + strand at 2525.150 kb on + strand at 2525.150 kb on + strand at 2525.150 kb on + strand at 2525.150 kb on + strand at 2525.150 kb on + strand at 2525.150 kb on + strand at 2525.150 kb on + strand at 2525.150 kb on + strand at 2525.150 kb on + strand at 2525.150 kb on + strand at 2525.151 kb on - strand at 2525.151 kb on - strand at 2525.151 kb on - strand at 2525.151 kb on - strand at 2525.151 kb on - strand at 2525.151 kb on - strand at 2525.151 kb on - strand at 2525.151 kb on - strand at 2525.208 kb on - strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.241 kb on + strand at 2525.241 kb on + strand at 2525.241 kb on + strand at 2525.241 kb on + strand at 2525.241 kb on + strand at 2525.242 kb on - strand at 2525.242 kb on - strand at 2525.242 kb on - strand at 2525.242 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM remove 2,524,003 - -1.3 2,524,003 - -1.6 2,524,003 - +0.7 2,524,003 - -1.8 2,524,003 - -1.0 2,524,003 - -2.6 2,524,003 - -1.8 2,524,003 - -1.0 2,524,003 - -0.7 2,524,003 - -0.6 2,524,336 - mraZ OKGIIK_11725 0.75 -0.3 2,524,336 - mraZ OKGIIK_11725 0.75 +1.0 2,524,336 - mraZ OKGIIK_11725 0.75 -1.6 2,524,336 - mraZ OKGIIK_11725 0.75 -0.9 2,524,336 - mraZ OKGIIK_11725 0.75 -1.9 2,524,336 - mraZ OKGIIK_11725 0.75 -0.0 2,524,336 - mraZ OKGIIK_11725 0.75 -2.0 2,524,336 - mraZ OKGIIK_11725 0.75 +0.3 2,524,336 - mraZ OKGIIK_11725 0.75 +1.0 2,524,336 - mraZ OKGIIK_11725 0.75 -1.5 2,524,336 - mraZ OKGIIK_11725 0.75 -2.0 2,524,336 - mraZ OKGIIK_11725 0.75 -2.2 2,524,336 - mraZ OKGIIK_11725 0.75 -0.0 2,524,336 - mraZ OKGIIK_11725 0.75 -1.3 2,524,465 - +0.4 2,524,547 - -0.5 2,524,547 - +1.6 2,524,625 - -0.3 2,524,625 - -0.7 2,524,629 - -1.3 2,524,629 - -1.0 2,524,629 - -0.3 2,524,629 - -0.5 2,524,629 - -1.1 2,524,629 - -1.3 2,524,629 - -0.3 2,524,629 - -1.8 2,524,629 - +0.4 2,525,150 + -1.6 2,525,150 + -2.7 2,525,150 + +1.0 2,525,150 + +0.7 2,525,150 + +1.3 2,525,150 + +1.0 2,525,150 + -1.0 2,525,150 + -0.6 2,525,150 + -1.3 2,525,150 + -0.0 2,525,150 + -2.5 2,525,150 + -2.0 2,525,151 - -1.0 2,525,151 - -0.9 2,525,151 - +0.7 2,525,151 - -0.0 2,525,151 - -0.9 2,525,151 - -1.2 2,525,151 - +1.0 2,525,151 - +1.0 2,525,208 - +1.0 2,525,239 + -0.6 2,525,239 + -0.1 2,525,239 + -1.3 2,525,239 + -0.3 2,525,239 + -0.3 2,525,239 + -1.0 2,525,239 + -1.1 2,525,239 + +0.7 2,525,239 + +0.6 2,525,239 + -0.3 2,525,239 + -1.6 2,525,239 + -1.5 2,525,239 + -0.6 2,525,239 + +0.4 2,525,239 + +0.7 2,525,239 + -0.8 2,525,239 + +2.3 2,525,239 + -1.6 2,525,239 + +0.6 2,525,239 + -0.8 2,525,239 + +1.0 2,525,239 + -0.0 2,525,239 + -1.0 2,525,239 + -2.2 2,525,239 + -0.3 2,525,239 + +0.6 2,525,239 + +1.4 2,525,240 - -0.8 2,525,240 - -1.3 2,525,240 - -1.3 2,525,240 - +1.0 2,525,240 - +2.6 2,525,240 - -0.6 2,525,240 - -1.8 2,525,240 - -0.0 2,525,240 - +0.3 2,525,240 - -0.3 2,525,240 - -0.0 2,525,240 - +1.0 2,525,240 - -0.8 2,525,240 - -1.3 2,525,240 - -1.3 2,525,240 - -1.7 2,525,240 - +1.5 2,525,240 - -0.0 2,525,240 - +1.6 2,525,240 - -0.0 2,525,240 - +0.8 2,525,240 - -0.1 2,525,240 - -1.0 2,525,241 + -0.6 2,525,241 + -1.0 2,525,241 + -0.1 2,525,241 + -1.0 2,525,241 + -1.7 2,525,242 - +0.6 2,525,242 - -1.3 2,525,242 - +0.5 2,525,242 - +0.1
Or see this region's nucleotide sequence