Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_11105

Experiment: NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
2,380,357	+		OKGIIK_11100	0.78	-0.6
2,380,357	+		OKGIIK_11100	0.78	+0.2
2,380,357	+		OKGIIK_11100	0.78	-0.2
2,380,357	+		OKGIIK_11100	0.78	+0.3
2,380,357	+		OKGIIK_11100	0.78	+0.3
2,380,357	+		OKGIIK_11100	0.78	-0.8
2,380,357	+		OKGIIK_11100	0.78	-1.2
2,380,358	-		OKGIIK_11100	0.78	-0.6
2,380,506	+		OKGIIK_11100	0.86	-0.6
2,380,506	+		OKGIIK_11100	0.86	-1.0
2,380,506	+		OKGIIK_11100	0.86	-0.6
2,380,506	+		OKGIIK_11100	0.86	-0.5
2,380,506	+		OKGIIK_11100	0.86	-0.0
2,380,506	+		OKGIIK_11100	0.86	-0.3
2,380,506	+		OKGIIK_11100	0.86	+2.0
2,380,506	+		OKGIIK_11100	0.86	-0.0
2,380,506	+		OKGIIK_11100	0.86	-1.7
2,380,506	+		OKGIIK_11100	0.86	-0.8
2,380,506	+		OKGIIK_11100	0.86	+0.8
2,380,506	+		OKGIIK_11100	0.86	-0.5
2,380,506	+		OKGIIK_11100	0.86	-0.4
2,380,506	+		OKGIIK_11100	0.86	-0.0
2,380,506	+		OKGIIK_11100	0.86	-1.0
2,380,507	-		OKGIIK_11100	0.86	+1.2
2,380,507	-		OKGIIK_11100	0.86	+3.0
2,380,507	-		OKGIIK_11100	0.86	+0.7
2,380,507	-		OKGIIK_11100	0.86	-0.0
2,380,507	-		OKGIIK_11100	0.86	+0.2
2,380,507	-		OKGIIK_11100	0.86	-1.0
2,380,507	-		OKGIIK_11100	0.86	+0.4
2,380,507	-		OKGIIK_11100	0.86	-1.3
2,380,507	-		OKGIIK_11100	0.86	-0.6
2,380,507	-		OKGIIK_11100	0.86	-2.2
2,380,507	-		OKGIIK_11100	0.86	-0.4
2,380,507	-		OKGIIK_11100	0.86	+2.0
2,380,507	-		OKGIIK_11100	0.86	-2.0
2,380,507	-		OKGIIK_11100	0.86	-0.7
2,380,507	-		OKGIIK_11100	0.86	-1.0
2,380,507	-		OKGIIK_11100	0.86	+1.0
2,380,507	-		OKGIIK_11100	0.86	+1.6
2,380,509	-		OKGIIK_11100	0.86	+2.6
2,380,755	+				+1.4
2,380,755	+				-1.2
2,380,755	+				-0.6
2,380,755	+				+1.2
2,380,755	+				+1.0
2,380,755	+				-0.0
2,380,755	+				+1.2
2,380,755	+				-1.8
2,380,756	-				-1.3
2,380,756	-				+1.9
2,380,756	-				-0.5
2,380,756	-				+0.6
2,380,756	-				+1.0
2,380,756	-				+0.4
2,380,756	-				+0.8
2,380,756	-				-2.5
2,380,756	-				+0.3
2,380,756	-				+1.3
2,380,756	-				+1.6
2,380,937	-				+1.0
2,380,937	-				-1.0
2,380,937	-				-0.3
2,380,937	-				-0.5
2,380,937	-				-0.2
2,380,937	-				-2.1
2,380,937	-				+0.6
2,380,952	+				+0.5
2,380,952	+				+0.2
2,380,953	-				-1.0
2,380,953	-				+0.7
2,380,953	-				-1.5
2,380,953	-				-1.6
2,380,953	-				-0.6
2,380,953	-				+0.6
2,380,953	-				-0.5
2,380,953	-				-0.0
2,380,953	-				-0.0
2,380,953	-				+0.7
2,380,953	-				+0.3
2,380,953	-				-0.2
2,380,953	-				-0.6
2,380,953	-				-0.6
2,380,953	-				-0.6
2,380,953	-				-1.6
2,380,953	-				-1.8
2,380,953	-				-0.6
2,380,973	+				+0.9
2,381,202	+				+1.8
2,381,202	+				+1.0
2,381,202	+				+1.0
2,381,202	+				-0.0
2,381,202	+				+1.0
2,381,202	+				-0.3
2,381,202	+				+0.7
2,381,202	+				-1.8
2,381,202	+				+0.4
2,381,202	+				+1.1
2,381,202	+				-0.7
2,381,218	+				-0.8
2,381,218	+				-1.4
2,381,218	+				+1.0
2,381,218	+				-3.0
2,381,298	+				-1.3
2,381,298	+				+1.0
2,381,299	-				+2.0
2,381,307	+				+1.0
2,381,307	+				-1.0
2,381,308	-				-1.3
2,381,365	+	baeS	OKGIIK_11105	0.12	-1.3
2,381,365	+	baeS	OKGIIK_11105	0.12	-0.8
2,381,366	-	baeS	OKGIIK_11105	0.12	+1.0
2,381,415	-	baeS	OKGIIK_11105	0.16	-0.0
2,381,553	+	baeS	OKGIIK_11105	0.26	-2.0
2,381,554	-	baeS	OKGIIK_11105	0.27	-2.1
2,381,554	-	baeS	OKGIIK_11105	0.27	+1.0
2,381,737	+	baeS	OKGIIK_11105	0.41	-1.6
2,381,738	-	baeS	OKGIIK_11105	0.41	-0.0
2,381,806	-	baeS	OKGIIK_11105	0.46	-0.6
2,381,813	+	baeS	OKGIIK_11105	0.47	-0.6
2,381,814	-	baeS	OKGIIK_11105	0.47	-0.0
2,381,884	+	baeS	OKGIIK_11105	0.53	-1.0
2,382,119	+	baeS	OKGIIK_11105	0.71	-0.6
2,382,121	-	baeS	OKGIIK_11105	0.71	-0.0
2,382,175	+	baeS	OKGIIK_11105	0.75	+1.0
2,382,176	-	baeS	OKGIIK_11105	0.76	-1.3
2,382,176	-	baeS	OKGIIK_11105	0.76	+1.4
2,382,176	-	baeS	OKGIIK_11105	0.76	+2.3
2,382,176	-	baeS	OKGIIK_11105	0.76	-2.0
2,382,265	+	baeS	OKGIIK_11105	0.83	-2.0
2,382,266	-	baeS	OKGIIK_11105	0.83	-0.6
2,382,345	-	baeS	OKGIIK_11105	0.89	-0.0
2,382,394	+				-1.8
2,382,394	+				+1.0
2,382,433	+				-0.0
2,382,433	+				+1.0
2,382,433	+				-1.3
2,382,433	+				-2.0
2,382,433	+				+1.3
2,382,433	+				+0.7
2,382,433	+				-1.8
2,382,581	+	ompR	OKGIIK_11110	0.15	-0.0
2,382,581	+	ompR	OKGIIK_11110	0.15	-0.6
2,382,581	+	ompR	OKGIIK_11110	0.15	-1.1
2,382,581	+	ompR	OKGIIK_11110	0.15	+1.4
2,382,582	-	ompR	OKGIIK_11110	0.15	+1.0
2,382,691	+	ompR	OKGIIK_11110	0.31	-1.6
2,382,692	-	ompR	OKGIIK_11110	0.31	+1.0
2,382,739	+	ompR	OKGIIK_11110	0.38	+1.0
2,382,739	+	ompR	OKGIIK_11110	0.38	+0.5
2,382,739	+	ompR	OKGIIK_11110	0.38	+0.2
2,382,739	+	ompR	OKGIIK_11110	0.38	-1.3
2,382,740	-	ompR	OKGIIK_11110	0.38	-1.4
2,382,740	-	ompR	OKGIIK_11110	0.38	+1.0
2,382,756	+	ompR	OKGIIK_11110	0.40	-0.2
2,382,756	+	ompR	OKGIIK_11110	0.40	-2.0
2,382,756	+	ompR	OKGIIK_11110	0.40	-0.5
2,382,756	+	ompR	OKGIIK_11110	0.40	-1.3
2,382,756	+	ompR	OKGIIK_11110	0.40	+2.2
2,382,756	+	ompR	OKGIIK_11110	0.40	+1.4
2,382,756	+	ompR	OKGIIK_11110	0.40	-1.0
2,382,756	+	ompR	OKGIIK_11110	0.40	-0.5
2,382,756	+	ompR	OKGIIK_11110	0.40	-1.8
2,382,756	+	ompR	OKGIIK_11110	0.40	+0.2
2,382,756	+	ompR	OKGIIK_11110	0.40	-0.4
2,382,756	+	ompR	OKGIIK_11110	0.40	+0.3
2,382,756	+	ompR	OKGIIK_11110	0.40	-0.6
2,382,756	+	ompR	OKGIIK_11110	0.40	-2.0
2,382,756	+	ompR	OKGIIK_11110	0.40	-0.6
2,382,757	-	ompR	OKGIIK_11110	0.41	+1.0
2,382,757	-	ompR	OKGIIK_11110	0.41	+0.9
2,382,757	-	ompR	OKGIIK_11110	0.41	+1.0
2,382,817	+	ompR	OKGIIK_11110	0.49	-0.2
2,382,817	+	ompR	OKGIIK_11110	0.49	-0.2
2,382,818	-	ompR	OKGIIK_11110	0.49	-2.7
2,382,872	+	ompR	OKGIIK_11110	0.57	+2.0
2,382,872	+	ompR	OKGIIK_11110	0.57	-0.0
2,382,872	+	ompR	OKGIIK_11110	0.57	-0.0
2,382,872	+	ompR	OKGIIK_11110	0.57	+0.1
2,382,872	+	ompR	OKGIIK_11110	0.57	-1.3
2,382,872	+	ompR	OKGIIK_11110	0.57	-0.8
2,382,872	+	ompR	OKGIIK_11110	0.57	+0.4
2,382,872	+	ompR	OKGIIK_11110	0.57	+2.2
2,382,872	+	ompR	OKGIIK_11110	0.57	-0.6
2,382,872	+	ompR	OKGIIK_11110	0.57	+1.8
2,382,872	+	ompR	OKGIIK_11110	0.57	-0.0
2,382,872	+	ompR	OKGIIK_11110	0.57	-0.4
2,382,872	+	ompR	OKGIIK_11110	0.57	+0.7
2,383,031	+	ompR	OKGIIK_11110	0.80	-0.0
2,383,031	+	ompR	OKGIIK_11110	0.80	+2.0
2,383,031	+	ompR	OKGIIK_11110	0.80	+0.4
2,383,031	+	ompR	OKGIIK_11110	0.80	-0.3
2,383,031	+	ompR	OKGIIK_11110	0.80	-2.0
2,383,031	+	ompR	OKGIIK_11110	0.80	-0.0
2,383,031	+	ompR	OKGIIK_11110	0.80	+0.7
2,383,031	+	ompR	OKGIIK_11110	0.80	+0.5
2,383,031	+	ompR	OKGIIK_11110	0.80	-0.8
2,383,031	+	ompR	OKGIIK_11110	0.80	+1.0
2,383,031	+	ompR	OKGIIK_11110	0.80	-0.6
2,383,031	+	ompR	OKGIIK_11110	0.80	-1.3
2,383,031	+	ompR	OKGIIK_11110	0.80	-0.9
2,383,031	+	ompR	OKGIIK_11110	0.80	+1.2
2,383,031	+	ompR	OKGIIK_11110	0.80	+1.1
2,383,032	-	ompR	OKGIIK_11110	0.80	-0.0
2,383,032	-	ompR	OKGIIK_11110	0.80	-1.6
2,383,032	-	ompR	OKGIIK_11110	0.80	-1.5
2,383,032	-	ompR	OKGIIK_11110	0.80	+1.4
2,383,032	-	ompR	OKGIIK_11110	0.80	-2.2
2,383,032	-	ompR	OKGIIK_11110	0.80	-0.0
2,383,209	+				+0.2
2,383,209	+				-0.8
2,383,390	+				+1.0
2,383,390	+				-1.8
2,383,421	+				+1.0
2,383,448	+				-2.0
2,383,448	+				-2.5