Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05880

Experiment: NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
1,288,159	+				-2.5
1,288,159	+				-2.4
1,288,159	+				-2.2
1,288,159	+				-1.5
1,288,160	-				-3.7
1,288,160	-				-1.8
1,288,160	-				-2.6
1,288,160	-				-1.8
1,288,160	-				-1.8
1,288,278	+		OKGIIK_05875	0.16	-3.4
1,288,278	+		OKGIIK_05875	0.16	-1.1
1,288,278	+		OKGIIK_05875	0.16	-2.9
1,288,279	-		OKGIIK_05875	0.16	-1.3
1,288,279	-		OKGIIK_05875	0.16	-1.2
1,288,279	-		OKGIIK_05875	0.16	-3.0
1,288,279	-		OKGIIK_05875	0.16	-2.8
1,288,279	-		OKGIIK_05875	0.16	-1.0
1,288,279	-		OKGIIK_05875	0.16	-2.2
1,288,279	-		OKGIIK_05875	0.16	-2.5
1,288,279	-		OKGIIK_05875	0.16	+1.4
1,288,300	+		OKGIIK_05875	0.18	-2.0
1,288,300	+		OKGIIK_05875	0.18	-3.0
1,288,300	+		OKGIIK_05875	0.18	-1.8
1,288,300	+		OKGIIK_05875	0.18	-2.0
1,288,300	+		OKGIIK_05875	0.18	-2.6
1,288,301	-		OKGIIK_05875	0.18	-2.3
1,288,301	-		OKGIIK_05875	0.18	+0.8
1,288,301	-		OKGIIK_05875	0.18	-2.1
1,288,301	-		OKGIIK_05875	0.18	-3.3
1,288,726	+		OKGIIK_05875	0.62	-1.5
1,288,726	+		OKGIIK_05875	0.62	-2.0
1,288,726	+		OKGIIK_05875	0.62	-0.5
1,288,726	+		OKGIIK_05875	0.62	-1.2
1,288,726	+		OKGIIK_05875	0.62	+0.8
1,288,726	+		OKGIIK_05875	0.62	-1.8
1,288,727	-		OKGIIK_05875	0.62	-1.5
1,288,727	-		OKGIIK_05875	0.62	-1.8
1,288,727	-		OKGIIK_05875	0.62	-0.2
1,288,727	-		OKGIIK_05875	0.62	-0.2
1,288,727	-		OKGIIK_05875	0.62	-3.4
1,288,727	-		OKGIIK_05875	0.62	+0.8
1,288,727	-		OKGIIK_05875	0.62	-1.8
1,288,727	-		OKGIIK_05875	0.62	-2.0
1,288,759	+		OKGIIK_05875	0.65	-2.3
1,288,759	+		OKGIIK_05875	0.65	-1.0
1,288,759	+		OKGIIK_05875	0.65	+0.8
1,288,759	+		OKGIIK_05875	0.65	-1.6
1,288,759	+		OKGIIK_05875	0.65	-2.9
1,288,759	+		OKGIIK_05875	0.65	-2.2
1,288,760	-		OKGIIK_05875	0.65	-1.2
1,288,760	-		OKGIIK_05875	0.65	-1.5
1,288,760	-		OKGIIK_05875	0.65	-1.0
1,288,760	-		OKGIIK_05875	0.65	-1.2
1,288,760	-		OKGIIK_05875	0.65	-2.3
1,288,760	-		OKGIIK_05875	0.65	-2.2
1,288,760	-		OKGIIK_05875	0.65	-2.0
1,288,798	+		OKGIIK_05875	0.69	-1.8
1,288,799	-		OKGIIK_05875	0.69	+0.8
1,288,799	-		OKGIIK_05875	0.69	-2.9
1,289,098	+				+1.4
1,289,098	+				+1.2
1,289,099	-				-3.2
1,289,099	-				+0.5
1,289,099	-				+0.5
1,289,099	-				+0.2
1,289,250	+	phaC	OKGIIK_05880	0.13	-0.2
1,289,250	+	phaC	OKGIIK_05880	0.13	-3.1
1,289,250	+	phaC	OKGIIK_05880	0.13	-0.8
1,289,250	+	phaC	OKGIIK_05880	0.13	-3.8
1,289,250	+	phaC	OKGIIK_05880	0.13	-1.8
1,289,251	-	phaC	OKGIIK_05880	0.13	-3.3
1,289,251	-	phaC	OKGIIK_05880	0.13	-1.6
1,289,272	+	phaC	OKGIIK_05880	0.15	-1.2
1,289,272	+	phaC	OKGIIK_05880	0.15	-0.8
1,289,272	+	phaC	OKGIIK_05880	0.15	-3.3
1,289,272	+	phaC	OKGIIK_05880	0.15	-5.3
1,289,272	+	phaC	OKGIIK_05880	0.15	-2.3
1,289,272	+	phaC	OKGIIK_05880	0.15	-1.8
1,289,272	+	phaC	OKGIIK_05880	0.15	+0.1
1,289,273	-	phaC	OKGIIK_05880	0.15	-2.0
1,289,273	-	phaC	OKGIIK_05880	0.15	-0.5
1,289,273	-	phaC	OKGIIK_05880	0.15	-0.5
1,289,273	-	phaC	OKGIIK_05880	0.15	-1.2
1,289,273	-	phaC	OKGIIK_05880	0.15	-2.2
1,289,273	-	phaC	OKGIIK_05880	0.15	-3.1
1,289,273	-	phaC	OKGIIK_05880	0.15	-2.0
1,289,273	-	phaC	OKGIIK_05880	0.15	-0.2
1,289,329	-	phaC	OKGIIK_05880	0.20	-0.2
1,289,329	-	phaC	OKGIIK_05880	0.20	-1.2
1,289,329	-	phaC	OKGIIK_05880	0.20	-1.8
1,289,415	+	phaC	OKGIIK_05880	0.28	-1.5
1,289,415	+	phaC	OKGIIK_05880	0.28	-1.2
1,289,415	+	phaC	OKGIIK_05880	0.28	-1.2
1,289,415	+	phaC	OKGIIK_05880	0.28	-1.2
1,289,415	+	phaC	OKGIIK_05880	0.28	-0.2
1,289,416	-	phaC	OKGIIK_05880	0.28	-2.0
1,289,416	-	phaC	OKGIIK_05880	0.28	-2.0
1,289,416	-	phaC	OKGIIK_05880	0.28	-2.2
1,289,416	-	phaC	OKGIIK_05880	0.28	-0.5
1,289,416	-	phaC	OKGIIK_05880	0.28	-1.5
1,289,416	-	phaC	OKGIIK_05880	0.28	-3.1
1,289,472	+	phaC	OKGIIK_05880	0.34	-1.5
1,289,472	+	phaC	OKGIIK_05880	0.34	-2.5
1,289,472	+	phaC	OKGIIK_05880	0.34	-1.9
1,289,472	+	phaC	OKGIIK_05880	0.34	-2.2
1,289,472	+	phaC	OKGIIK_05880	0.34	-1.2
1,289,472	+	phaC	OKGIIK_05880	0.34	-3.0
1,289,473	-	phaC	OKGIIK_05880	0.34	-1.0
1,289,484	+	phaC	OKGIIK_05880	0.35	-0.8
1,289,484	+	phaC	OKGIIK_05880	0.35	-1.5
1,289,484	+	phaC	OKGIIK_05880	0.35	-4.4
1,289,484	+	phaC	OKGIIK_05880	0.35	-1.8
1,289,580	+	phaC	OKGIIK_05880	0.44	-1.2
1,289,580	+	phaC	OKGIIK_05880	0.44	-0.8
1,289,580	+	phaC	OKGIIK_05880	0.44	-1.5
1,289,580	+	phaC	OKGIIK_05880	0.44	-0.8
1,289,580	+	phaC	OKGIIK_05880	0.44	-1.2
1,289,580	+	phaC	OKGIIK_05880	0.44	-1.5
1,289,581	-	phaC	OKGIIK_05880	0.44	-2.0
1,289,581	-	phaC	OKGIIK_05880	0.44	+0.1
1,289,581	-	phaC	OKGIIK_05880	0.44	-1.5
1,289,581	-	phaC	OKGIIK_05880	0.44	-1.8
1,289,581	-	phaC	OKGIIK_05880	0.44	-1.8
1,289,739	+	phaC	OKGIIK_05880	0.59	-1.8
1,289,739	+	phaC	OKGIIK_05880	0.59	-0.2
1,289,739	+	phaC	OKGIIK_05880	0.59	+0.2
1,289,739	+	phaC	OKGIIK_05880	0.59	-2.2
1,289,739	+	phaC	OKGIIK_05880	0.59	-0.2
1,289,739	+	phaC	OKGIIK_05880	0.59	-1.8
1,289,739	+	phaC	OKGIIK_05880	0.59	-3.2
1,289,739	+	phaC	OKGIIK_05880	0.59	-0.2
1,289,739	+	phaC	OKGIIK_05880	0.59	-1.8
1,289,739	+	phaC	OKGIIK_05880	0.59	-0.8
1,289,739	+	phaC	OKGIIK_05880	0.59	-0.8
1,289,739	+	phaC	OKGIIK_05880	0.59	-2.6
1,289,739	+	phaC	OKGIIK_05880	0.59	+0.8
1,289,739	+	phaC	OKGIIK_05880	0.59	-2.2
1,289,740	-	phaC	OKGIIK_05880	0.59	-2.2
1,289,740	-	phaC	OKGIIK_05880	0.59	-2.0
1,289,740	-	phaC	OKGIIK_05880	0.59	-0.2
1,289,740	-	phaC	OKGIIK_05880	0.59	-2.8
1,289,740	-	phaC	OKGIIK_05880	0.59	-0.2
1,289,740	-	phaC	OKGIIK_05880	0.59	-1.8
1,289,740	-	phaC	OKGIIK_05880	0.59	-1.5
1,289,740	-	phaC	OKGIIK_05880	0.59	-1.3
1,289,740	-	phaC	OKGIIK_05880	0.59	-0.2
1,289,740	-	phaC	OKGIIK_05880	0.59	+0.8
1,289,740	-	phaC	OKGIIK_05880	0.59	+0.8
1,289,740	-	phaC	OKGIIK_05880	0.59	-2.3
1,289,740	-	phaC	OKGIIK_05880	0.59	-1.2
1,289,740	-	phaC	OKGIIK_05880	0.59	+0.4
1,289,740	-	phaC	OKGIIK_05880	0.59	-1.2
1,289,740	-	phaC	OKGIIK_05880	0.59	-2.3
1,289,740	-	phaC	OKGIIK_05880	0.59	-1.5
1,289,740	-	phaC	OKGIIK_05880	0.59	+0.8
1,289,745	+	phaC	OKGIIK_05880	0.59	-1.5
1,289,746	-	phaC	OKGIIK_05880	0.59	-0.8
1,289,746	-	phaC	OKGIIK_05880	0.59	-1.5
1,289,784	+	phaC	OKGIIK_05880	0.63	-2.6
1,289,784	+	phaC	OKGIIK_05880	0.63	+0.8
1,289,784	+	phaC	OKGIIK_05880	0.63	-5.0
1,289,784	+	phaC	OKGIIK_05880	0.63	-0.4
1,289,784	+	phaC	OKGIIK_05880	0.63	-3.3
1,289,784	+	phaC	OKGIIK_05880	0.63	-2.7
1,289,784	+	phaC	OKGIIK_05880	0.63	-2.2
1,289,784	+	phaC	OKGIIK_05880	0.63	-1.2
1,289,784	+	phaC	OKGIIK_05880	0.63	-0.8
1,289,784	+	phaC	OKGIIK_05880	0.63	-2.3
1,289,784	+	phaC	OKGIIK_05880	0.63	-1.2
1,289,784	+	phaC	OKGIIK_05880	0.63	-0.2
1,289,784	+	phaC	OKGIIK_05880	0.63	-0.9
1,289,784	+	phaC	OKGIIK_05880	0.63	-1.2
1,289,785	-	phaC	OKGIIK_05880	0.63	-1.2
1,289,785	-	phaC	OKGIIK_05880	0.63	-1.8
1,289,785	-	phaC	OKGIIK_05880	0.63	+0.8
1,289,785	-	phaC	OKGIIK_05880	0.63	-2.9
1,289,785	-	phaC	OKGIIK_05880	0.63	-2.0
1,289,785	-	phaC	OKGIIK_05880	0.63	-1.5
1,289,785	-	phaC	OKGIIK_05880	0.63	-2.0
1,289,785	-	phaC	OKGIIK_05880	0.63	-4.5
1,289,785	-	phaC	OKGIIK_05880	0.63	-2.5
1,289,785	-	phaC	OKGIIK_05880	0.63	-2.5
1,289,785	-	phaC	OKGIIK_05880	0.63	-3.3
1,289,785	-	phaC	OKGIIK_05880	0.63	-2.2
1,289,785	-	phaC	OKGIIK_05880	0.63	-0.8
1,289,785	-	phaC	OKGIIK_05880	0.63	-2.5
1,289,910	+	phaC	OKGIIK_05880	0.75	-1.2
1,289,910	+	phaC	OKGIIK_05880	0.75	-1.2
1,289,910	+	phaC	OKGIIK_05880	0.75	-3.2
1,289,910	+	phaC	OKGIIK_05880	0.75	-1.8
1,289,911	-	phaC	OKGIIK_05880	0.75	-1.8
1,289,911	-	phaC	OKGIIK_05880	0.75	-1.9
1,289,911	-	phaC	OKGIIK_05880	0.75	-2.6
1,289,911	-	phaC	OKGIIK_05880	0.75	-0.6
1,290,072	+	phaC	OKGIIK_05880	0.90	-1.2
1,290,072	+	phaC	OKGIIK_05880	0.90	-1.5
1,290,072	+	phaC	OKGIIK_05880	0.90	-1.8
1,290,072	+	phaC	OKGIIK_05880	0.90	-1.5
1,290,072	+	phaC	OKGIIK_05880	0.90	-0.2
1,290,072	+	phaC	OKGIIK_05880	0.90	-1.8
1,290,072	+	phaC	OKGIIK_05880	0.90	-2.2
1,290,073	-				-2.0
1,290,073	-				-1.2
1,290,073	-				-0.6
1,290,073	-				-3.0
1,290,111	+				-1.8
1,290,111	+				-1.2
1,290,111	+				-2.6
1,290,111	+				-2.0
1,290,111	+				-1.2
1,290,111	+				+1.8
1,290,111	+				-1.5
1,290,111	+				-1.2
1,290,111	+				-0.5
1,290,111	+				-0.8
1,290,111	+				-1.5
1,290,111	+				-1.5
1,290,111	+				-2.0
1,290,111	+				-2.8
1,290,111	+				-0.8
1,290,111	+				-1.5
1,290,111	+				-2.2
1,290,111	+				-2.5
1,290,111	+				-2.2
1,290,111	+				-1.8
1,290,111	+				-2.2
1,290,111	+				-3.5
1,290,111	+				-1.3
1,290,111	+				+1.2
1,290,111	-				-3.9
1,290,112	-				-1.5
1,290,112	-				-1.8
1,290,112	-				+1.0
1,290,112	-				-0.8
1,290,112	-				-1.5
1,290,112	-				-0.8
1,290,112	-				-1.8
1,290,112	-				+0.8
1,290,112	-				-1.8
1,290,112	-				-3.6
1,290,112	-				-2.4
1,290,112	-				-2.1
1,290,112	-				-1.8
1,290,112	-				-2.3
1,290,112	-				-1.2
1,290,112	-				-2.5
1,290,112	-				-0.2
1,290,112	-				+0.5
1,290,112	-				-3.6
1,290,112	-				-1.5
1,290,204	+				+0.2
1,290,204	+				+0.3
1,290,204	+				-0.6
1,290,204	+				-1.5
1,290,204	+				-2.0
1,290,204	+				-1.0
1,290,204	+				+0.5
1,290,205	-				-0.8
1,290,205	-				+3.8
1,290,205	-				-0.1
1,290,205	-				+0.0
1,290,205	-				-1.8
1,290,222	+				+0.2
1,290,769	+	mtnA	OKGIIK_05885	0.53	+0.8
1,290,964	+	mtnA	OKGIIK_05885	0.72	-2.0
1,290,964	+	mtnA	OKGIIK_05885	0.72	-1.8
1,290,964	+	mtnA	OKGIIK_05885	0.72	-0.2
1,290,964	+	mtnA	OKGIIK_05885	0.72	+1.5
1,290,964	+	mtnA	OKGIIK_05885	0.72	-0.2
1,290,964	+	mtnA	OKGIIK_05885	0.72	-0.6
1,290,964	+	mtnA	OKGIIK_05885	0.72	-0.9
1,290,964	+	mtnA	OKGIIK_05885	0.72	+0.9
1,290,964	+	mtnA	OKGIIK_05885	0.72	-3.3
1,290,964	+	mtnA	OKGIIK_05885	0.72	+0.6
1,290,964	+	mtnA	OKGIIK_05885	0.72	-2.6
1,290,964	+	mtnA	OKGIIK_05885	0.72	+1.2
1,290,964	+	mtnA	OKGIIK_05885	0.72	-0.5
1,290,964	+	mtnA	OKGIIK_05885	0.72	-0.2
1,290,965	-	mtnA	OKGIIK_05885	0.72	+1.0
1,290,965	-	mtnA	OKGIIK_05885	0.72	-0.2
1,290,965	-	mtnA	OKGIIK_05885	0.72	-0.2
1,290,965	-	mtnA	OKGIIK_05885	0.72	+0.8
1,290,965	-	mtnA	OKGIIK_05885	0.72	-0.2
1,290,965	-	mtnA	OKGIIK_05885	0.72	+0.8
1,290,965	-	mtnA	OKGIIK_05885	0.72	+2.1
1,290,965	-	mtnA	OKGIIK_05885	0.72	-0.8
1,290,965	-	mtnA	OKGIIK_05885	0.72	+0.2
1,290,965	-	mtnA	OKGIIK_05885	0.72	+0.5
1,290,988	+	mtnA	OKGIIK_05885	0.74	+2.8
1,290,988	+	mtnA	OKGIIK_05885	0.74	+1.1
1,290,988	+	mtnA	OKGIIK_05885	0.74	+0.8
1,290,988	+	mtnA	OKGIIK_05885	0.74	+1.6
1,290,988	+	mtnA	OKGIIK_05885	0.74	-0.9
1,290,988	+	mtnA	OKGIIK_05885	0.74	+0.8
1,290,989	-	mtnA	OKGIIK_05885	0.74	+0.1
1,290,989	-	mtnA	OKGIIK_05885	0.74	+1.8
1,290,989	-	mtnA	OKGIIK_05885	0.74	-0.8
1,290,989	-	mtnA	OKGIIK_05885	0.74	-1.8
1,290,989	-	mtnA	OKGIIK_05885	0.74	-1.4