Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05840
Experiment: NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM |
|---|---|---|---|---|---|
| remove | |||||
| 1,278,656 | + | +0.8 | |||
| 1,278,656 | + | +2.1 | |||
| 1,278,721 | + | -0.8 | |||
| 1,278,721 | + | -0.6 | |||
| 1,278,731 | + | -0.8 | |||
| 1,278,731 | + | -0.6 | |||
| 1,278,731 | + | -1.2 | |||
| 1,278,824 | + | rimP | OKGIIK_05840 | 0.18 | +0.8 |
| 1,278,963 | + | rimP | OKGIIK_05840 | 0.44 | -1.2 |
| 1,278,963 | + | rimP | OKGIIK_05840 | 0.44 | +0.8 |
| 1,278,963 | + | rimP | OKGIIK_05840 | 0.44 | -2.3 |
| 1,278,963 | + | rimP | OKGIIK_05840 | 0.44 | +0.1 |
| 1,278,963 | + | rimP | OKGIIK_05840 | 0.44 | -0.2 |
| 1,278,963 | + | rimP | OKGIIK_05840 | 0.44 | -1.8 |
| 1,279,298 | + | -0.7 | |||
| 1,279,298 | + | -0.2 | |||
| 1,279,298 | + | +0.1 | |||
| 1,279,298 | + | -0.2 | |||
| 1,279,298 | + | -0.5 | |||
| 1,279,298 | + | +1.2 | |||
| 1,279,298 | + | -0.2 | |||
| 1,279,298 | + | +0.3 | |||
| 1,279,402 | + | +0.1 | |||
| 1,279,402 | + | +0.4 | |||
| 1,279,402 | + | +2.8 | |||
| 1,279,427 | + | +1.6 | |||
| 1,279,427 | + | -0.8 | |||
| 1,279,427 | + | -0.5 |
Or see this region's nucleotide sequence