Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_04960

Experiment: NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
1,075,746	+	hisC	OKGIIK_04955	0.18	-1.2
1,075,746	+	hisC	OKGIIK_04955	0.18	-2.2
1,075,746	+	hisC	OKGIIK_04955	0.18	-3.2
1,075,746	+	hisC	OKGIIK_04955	0.18	-1.8
1,075,747	-	hisC	OKGIIK_04955	0.18	-2.6
1,075,747	-	hisC	OKGIIK_04955	0.18	-1.5
1,075,747	-	hisC	OKGIIK_04955	0.18	-3.3
1,075,843	+	hisC	OKGIIK_04955	0.27	-4.6
1,075,843	+	hisC	OKGIIK_04955	0.27	-2.6
1,075,844	-	hisC	OKGIIK_04955	0.27	-4.8
1,075,844	-	hisC	OKGIIK_04955	0.27	-2.6
1,075,872	+	hisC	OKGIIK_04955	0.30	-1.5
1,075,872	+	hisC	OKGIIK_04955	0.30	-0.8
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.3
1,075,872	+	hisC	OKGIIK_04955	0.30	-1.5
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.3
1,075,872	+	hisC	OKGIIK_04955	0.30	-1.2
1,075,872	+	hisC	OKGIIK_04955	0.30	-3.3
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.9
1,075,872	+	hisC	OKGIIK_04955	0.30	-3.3
1,075,872	+	hisC	OKGIIK_04955	0.30	-0.8
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.0
1,075,872	+	hisC	OKGIIK_04955	0.30	-0.8
1,075,872	+	hisC	OKGIIK_04955	0.30	-4.5
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.8
1,075,872	+	hisC	OKGIIK_04955	0.30	-1.2
1,075,872	+	hisC	OKGIIK_04955	0.30	-1.5
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.8
1,075,872	+	hisC	OKGIIK_04955	0.30	-0.2
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.5
1,075,873	-	hisC	OKGIIK_04955	0.30	-1.2
1,075,873	-	hisC	OKGIIK_04955	0.30	-3.6
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.0
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.2
1,075,873	-	hisC	OKGIIK_04955	0.30	-1.2
1,075,873	-	hisC	OKGIIK_04955	0.30	-0.2
1,075,873	-	hisC	OKGIIK_04955	0.30	-1.2
1,075,873	-	hisC	OKGIIK_04955	0.30	-1.8
1,075,873	-	hisC	OKGIIK_04955	0.30	-0.2
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.3
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.0
1,075,873	-	hisC	OKGIIK_04955	0.30	-1.8
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.0
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.8
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.8
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.2
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.5
1,076,097	+	hisC	OKGIIK_04955	0.50	-0.8
1,076,097	+	hisC	OKGIIK_04955	0.50	-0.8
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.3
1,076,097	+	hisC	OKGIIK_04955	0.50	-4.5
1,076,097	+	hisC	OKGIIK_04955	0.50	-3.0
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.8
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.0
1,076,097	+	hisC	OKGIIK_04955	0.50	-3.8
1,076,097	+	hisC	OKGIIK_04955	0.50	-0.8
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.3
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.5
1,076,097	+	hisC	OKGIIK_04955	0.50	-3.0
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.2
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.0
1,076,097	+	hisC	OKGIIK_04955	0.50	-3.3
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.3
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.6
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.5
1,076,097	+	hisC	OKGIIK_04955	0.50	-0.2
1,076,098	-	hisC	OKGIIK_04955	0.50	+0.8
1,076,098	-	hisC	OKGIIK_04955	0.50	-2.6
1,076,098	-	hisC	OKGIIK_04955	0.50	-3.0
1,076,098	-	hisC	OKGIIK_04955	0.50	-2.0
1,076,098	-	hisC	OKGIIK_04955	0.50	-3.1
1,076,098	-	hisC	OKGIIK_04955	0.50	-3.2
1,076,098	-	hisC	OKGIIK_04955	0.50	-2.0
1,076,098	-	hisC	OKGIIK_04955	0.50	-3.7
1,076,098	-	hisC	OKGIIK_04955	0.50	+0.8
1,076,098	-	hisC	OKGIIK_04955	0.50	-1.5
1,076,098	-	hisC	OKGIIK_04955	0.50	-2.3
1,076,204	+	hisC	OKGIIK_04955	0.60	-1.5
1,076,443	+	hisC	OKGIIK_04955	0.82	-1.5
1,076,443	+	hisC	OKGIIK_04955	0.82	-2.2
1,076,444	-	hisC	OKGIIK_04955	0.82	-1.6
1,076,444	-	hisC	OKGIIK_04955	0.82	-2.8
1,076,444	-	hisC	OKGIIK_04955	0.82	-1.8
1,076,444	-	hisC	OKGIIK_04955	0.82	-2.3
1,076,587	+				-0.6
1,076,587	+				-0.2
1,076,588	-				-0.9
1,076,588	-				-2.2
1,076,652	+				+0.3
1,076,652	+				+1.2
1,076,652	+				-0.2
1,076,653	-				-0.8
1,076,653	-				-0.7
1,076,653	-				-0.8
1,076,653	-				-1.4
1,076,653	-				+0.1
1,076,653	-				-1.5
1,076,653	-				+0.8
1,076,714	+				-0.8
1,076,714	+				-3.4
1,076,714	+				-3.3
1,076,715	-				-0.2
1,076,715	-				-2.9
1,076,715	-				-1.5
1,076,975	+	hisB	OKGIIK_04960	0.32	-0.2
1,076,975	+	hisB	OKGIIK_04960	0.32	-1.8
1,076,975	+	hisB	OKGIIK_04960	0.32	-1.8
1,076,976	-	hisB	OKGIIK_04960	0.32	-1.4
1,076,976	-	hisB	OKGIIK_04960	0.32	-0.8
1,076,976	-	hisB	OKGIIK_04960	0.32	-4.1
1,077,467	+	hisB	OKGIIK_04960	0.78	-1.5
1,077,467	+	hisB	OKGIIK_04960	0.78	-1.2
1,077,467	+	hisB	OKGIIK_04960	0.78	-3.6
1,077,467	+	hisB	OKGIIK_04960	0.78	-3.2
1,077,467	+	hisB	OKGIIK_04960	0.78	-2.9
1,077,467	+	hisB	OKGIIK_04960	0.78	-3.1
1,077,467	+	hisB	OKGIIK_04960	0.78	-2.3
1,077,467	+	hisB	OKGIIK_04960	0.78	-3.0
1,077,468	-	hisB	OKGIIK_04960	0.78	-2.3
1,077,468	-	hisB	OKGIIK_04960	0.78	-1.8
1,077,468	-	hisB	OKGIIK_04960	0.78	-0.2
1,077,468	-	hisB	OKGIIK_04960	0.78	-2.0
1,077,468	-	hisB	OKGIIK_04960	0.78	-2.2
1,077,468	-	hisB	OKGIIK_04960	0.78	-1.8
1,077,468	-	hisB	OKGIIK_04960	0.78	-1.8
1,077,468	-	hisB	OKGIIK_04960	0.78	-3.1
1,077,504	+	hisB	OKGIIK_04960	0.81	-2.6
1,077,505	-	hisB	OKGIIK_04960	0.81	-2.0
1,077,701	+				-1.0
1,077,701	+				+0.1
1,077,701	+				-0.2
1,077,701	+				+1.3
1,077,701	+				+0.2
1,077,701	+				-0.8
1,077,701	+				+3.4
1,077,701	+				+1.0
1,077,701	+				+0.8
1,077,701	+				+0.1
1,077,701	+				+0.8
1,077,701	+				-0.2
1,077,702	-				+0.6
1,077,702	-				+0.2
1,077,702	-				-0.2
1,077,702	-				+2.0
1,077,702	-				-1.2
1,077,702	-				-0.8
1,077,702	-				+0.8
1,077,702	-				-0.4
1,077,702	-				-2.0
1,077,702	-				-3.1
1,077,702	-				-2.7
1,077,702	-				-0.6
1,077,702	-				-0.2
1,077,750	+				+1.4
1,077,750	+				+1.2
1,077,751	-				-1.2
1,077,751	-				-2.0
1,077,751	-				+0.8
1,077,751	-				-4.6
1,077,751	-				+0.8
1,077,808	+				-1.8
1,077,808	+				-1.5
1,077,808	+				-2.0
1,077,808	+				-0.2
1,077,808	+				-3.7
1,077,808	+				+0.8
1,077,808	+				+0.5
1,077,808	+				-0.2
1,077,809	-				-2.3
1,077,809	-				-1.8
1,077,809	-				-2.2
1,077,809	-				-1.2
1,077,809	-				+0.8
1,077,809	-				-1.9
1,077,809	-				-2.2
1,077,809	-				-2.3
1,077,809	-				-0.2
1,077,859	+				-1.2
1,077,859	+				-1.2
1,077,859	+				-1.2
1,078,157	+	hisH	OKGIIK_04965	0.58	-3.6
1,078,157	+	hisH	OKGIIK_04965	0.58	-2.0
1,078,157	+	hisH	OKGIIK_04965	0.58	-1.5
1,078,157	+	hisH	OKGIIK_04965	0.58	-3.5
1,078,158	-	hisH	OKGIIK_04965	0.58	-2.3
1,078,158	-	hisH	OKGIIK_04965	0.58	-1.2
1,078,230	+	hisH	OKGIIK_04965	0.70	-2.0
1,078,230	+	hisH	OKGIIK_04965	0.70	-2.0
1,078,230	+	hisH	OKGIIK_04965	0.70	-2.8
1,078,230	+	hisH	OKGIIK_04965	0.70	-1.8
1,078,230	+	hisH	OKGIIK_04965	0.70	-1.8
1,078,230	+	hisH	OKGIIK_04965	0.70	-2.8
1,078,230	+	hisH	OKGIIK_04965	0.70	-2.2
1,078,231	-	hisH	OKGIIK_04965	0.71	-2.6
1,078,231	-	hisH	OKGIIK_04965	0.71	-1.6
1,078,231	-	hisH	OKGIIK_04965	0.71	-1.5
1,078,231	-	hisH	OKGIIK_04965	0.71	-2.5
1,078,245	+	hisH	OKGIIK_04965	0.73	-2.0
1,078,245	+	hisH	OKGIIK_04965	0.73	-3.5
1,078,245	+	hisH	OKGIIK_04965	0.73	-1.5
1,078,245	+	hisH	OKGIIK_04965	0.73	-1.8
1,078,245	+	hisH	OKGIIK_04965	0.73	-1.5
1,078,245	+	hisH	OKGIIK_04965	0.73	-2.2
1,078,245	+	hisH	OKGIIK_04965	0.73	-1.8
1,078,245	+	hisH	OKGIIK_04965	0.73	-0.8
1,078,245	+	hisH	OKGIIK_04965	0.73	-2.0
1,078,245	+	hisH	OKGIIK_04965	0.73	-2.3
1,078,245	+	hisH	OKGIIK_04965	0.73	-2.0
1,078,245	+	hisH	OKGIIK_04965	0.73	-0.8
1,078,246	-	hisH	OKGIIK_04965	0.73	-1.8
1,078,246	-	hisH	OKGIIK_04965	0.73	-1.5
1,078,246	-	hisH	OKGIIK_04965	0.73	-1.8
1,078,246	-	hisH	OKGIIK_04965	0.73	-2.9
1,078,246	-	hisH	OKGIIK_04965	0.73	-0.3
1,078,246	-	hisH	OKGIIK_04965	0.73	-2.3
1,078,399	+				+1.1
1,078,399	+				+1.8
1,078,399	+				-2.0
1,078,399	+				+3.8
1,078,399	+				+0.8
1,078,399	+				+1.4
1,078,399	+				-0.4
1,078,399	+				+0.4
1,078,399	+				-2.3
1,078,400	-				-1.5
1,078,400	-				+1.1
1,078,400	-				-2.5
1,078,400	-				-1.5
1,078,400	-				-0.3
1,078,400	-				-2.8
1,078,400	-				-4.1
1,078,400	-				-0.2
1,078,400	-				-0.0
1,078,469	+				-1.2
1,078,470	-				-0.2
1,078,470	-				-2.8
1,078,470	-				-0.8
1,078,470	-				-1.5
1,078,487	+	hisA	OKGIIK_04970	0.12	-1.2
1,078,487	+	hisA	OKGIIK_04970	0.12	-1.2
1,078,487	+	hisA	OKGIIK_04970	0.12	-0.8
1,078,487	+	hisA	OKGIIK_04970	0.12	-3.1
1,078,487	+	hisA	OKGIIK_04970	0.12	-1.8
1,078,487	+	hisA	OKGIIK_04970	0.12	-0.2
1,078,487	+	hisA	OKGIIK_04970	0.12	-2.6
1,078,487	+	hisA	OKGIIK_04970	0.12	-1.8
1,078,488	-	hisA	OKGIIK_04970	0.12	-2.2
1,078,488	-	hisA	OKGIIK_04970	0.12	-1.8
1,078,488	-	hisA	OKGIIK_04970	0.12	-1.5
1,078,488	-	hisA	OKGIIK_04970	0.12	-3.8
1,078,488	-	hisA	OKGIIK_04970	0.12	-3.3
1,078,488	-	hisA	OKGIIK_04970	0.12	-0.2
1,078,488	-	hisA	OKGIIK_04970	0.12	-2.3
1,078,488	-	hisA	OKGIIK_04970	0.12	-3.0
1,078,488	-	hisA	OKGIIK_04970	0.12	-2.3
1,078,488	-	hisA	OKGIIK_04970	0.12	-1.2
1,078,488	-	hisA	OKGIIK_04970	0.12	-1.3
1,078,488	-	hisA	OKGIIK_04970	0.12	-0.2
1,078,488	-	hisA	OKGIIK_04970	0.12	-2.0
1,078,488	-	hisA	OKGIIK_04970	0.12	-1.2
1,078,488	-	hisA	OKGIIK_04970	0.12	-3.6
1,078,488	-	hisA	OKGIIK_04970	0.12	-2.9
1,078,488	-	hisA	OKGIIK_04970	0.12	-1.2
1,078,521	-	hisA	OKGIIK_04970	0.17	-3.0
1,078,521	-	hisA	OKGIIK_04970	0.17	-2.3
1,078,650	+	hisA	OKGIIK_04970	0.34	-1.2
1,078,651	-	hisA	OKGIIK_04970	0.34	-2.6
1,078,651	-	hisA	OKGIIK_04970	0.34	-2.0