Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_04955

Experiment: NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
1,074,631	+	hisD	OKGIIK_04950	0.29	-1.5
1,074,631	+	hisD	OKGIIK_04950	0.29	-4.2
1,074,631	+	hisD	OKGIIK_04950	0.29	-0.8
1,074,631	+	hisD	OKGIIK_04950	0.29	-3.0
1,074,631	+	hisD	OKGIIK_04950	0.29	-0.8
1,074,631	+	hisD	OKGIIK_04950	0.29	-2.2
1,074,631	+	hisD	OKGIIK_04950	0.29	+0.0
1,074,631	+	hisD	OKGIIK_04950	0.29	-2.6
1,074,631	+	hisD	OKGIIK_04950	0.29	-1.5
1,074,631	+	hisD	OKGIIK_04950	0.29	-1.2
1,074,631	+	hisD	OKGIIK_04950	0.29	-2.6
1,074,631	+	hisD	OKGIIK_04950	0.29	-1.2
1,074,631	+	hisD	OKGIIK_04950	0.29	-2.3
1,074,632	-	hisD	OKGIIK_04950	0.29	-1.5
1,074,632	-	hisD	OKGIIK_04950	0.29	-1.8
1,074,632	-	hisD	OKGIIK_04950	0.29	-2.8
1,074,632	-	hisD	OKGIIK_04950	0.29	-0.2
1,074,632	-	hisD	OKGIIK_04950	0.29	-1.5
1,074,632	-	hisD	OKGIIK_04950	0.29	-0.8
1,074,632	-	hisD	OKGIIK_04950	0.29	-2.0
1,074,632	-	hisD	OKGIIK_04950	0.29	-0.2
1,074,632	-	hisD	OKGIIK_04950	0.29	-3.3
1,074,632	-	hisD	OKGIIK_04950	0.29	-1.2
1,074,632	-	hisD	OKGIIK_04950	0.29	-1.5
1,074,632	-	hisD	OKGIIK_04950	0.29	-1.8
1,074,766	+	hisD	OKGIIK_04950	0.39	-2.6
1,074,766	+	hisD	OKGIIK_04950	0.39	-2.3
1,074,766	+	hisD	OKGIIK_04950	0.39	-1.5
1,074,767	-	hisD	OKGIIK_04950	0.40	-1.8
1,074,767	-	hisD	OKGIIK_04950	0.40	-3.2
1,074,767	-	hisD	OKGIIK_04950	0.40	-0.8
1,074,767	-	hisD	OKGIIK_04950	0.40	-3.1
1,074,767	-	hisD	OKGIIK_04950	0.40	-0.2
1,074,767	-	hisD	OKGIIK_04950	0.40	-3.0
1,074,767	-	hisD	OKGIIK_04950	0.40	+0.2
1,074,767	-	hisD	OKGIIK_04950	0.40	-2.2
1,074,838	+	hisD	OKGIIK_04950	0.45	-3.3
1,074,839	-	hisD	OKGIIK_04950	0.45	-2.2
1,074,839	-	hisD	OKGIIK_04950	0.45	-1.2
1,074,839	-	hisD	OKGIIK_04950	0.45	-1.5
1,074,839	-	hisD	OKGIIK_04950	0.45	-2.8
1,075,336	+	hisD	OKGIIK_04950	0.83	-2.3
1,075,336	+	hisD	OKGIIK_04950	0.83	-0.9
1,075,336	+	hisD	OKGIIK_04950	0.83	-1.2
1,075,336	+	hisD	OKGIIK_04950	0.83	-0.3
1,075,337	-	hisD	OKGIIK_04950	0.83	-2.3
1,075,337	-	hisD	OKGIIK_04950	0.83	-1.6
1,075,369	+	hisD	OKGIIK_04950	0.86	-1.8
1,075,369	+	hisD	OKGIIK_04950	0.86	-1.5
1,075,369	+	hisD	OKGIIK_04950	0.86	-1.8
1,075,369	+	hisD	OKGIIK_04950	0.86	+0.5
1,075,369	+	hisD	OKGIIK_04950	0.86	-1.8
1,075,369	+	hisD	OKGIIK_04950	0.86	-2.5
1,075,370	-	hisD	OKGIIK_04950	0.86	-0.4
1,075,370	-	hisD	OKGIIK_04950	0.86	+0.8
1,075,370	-	hisD	OKGIIK_04950	0.86	-0.8
1,075,370	-	hisD	OKGIIK_04950	0.86	-3.5
1,075,370	-	hisD	OKGIIK_04950	0.86	-3.0
1,075,370	-	hisD	OKGIIK_04950	0.86	-2.8
1,075,370	-	hisD	OKGIIK_04950	0.86	-2.3
1,075,370	-	hisD	OKGIIK_04950	0.86	-0.8
1,075,370	-	hisD	OKGIIK_04950	0.86	-2.6
1,075,370	-	hisD	OKGIIK_04950	0.86	-1.5
1,075,370	-	hisD	OKGIIK_04950	0.86	-0.8
1,075,370	-	hisD	OKGIIK_04950	0.86	-3.3
1,075,370	-	hisD	OKGIIK_04950	0.86	-4.1
1,075,370	-	hisD	OKGIIK_04950	0.86	-2.0
1,075,376	-	hisD	OKGIIK_04950	0.86	-1.2
1,075,387	+	hisD	OKGIIK_04950	0.87	-3.7
1,075,387	+	hisD	OKGIIK_04950	0.87	-0.8
1,075,387	+	hisD	OKGIIK_04950	0.87	-0.9
1,075,387	+	hisD	OKGIIK_04950	0.87	-1.5
1,075,387	+	hisD	OKGIIK_04950	0.87	-1.5
1,075,387	+	hisD	OKGIIK_04950	0.87	-0.8
1,075,387	+	hisD	OKGIIK_04950	0.87	-3.2
1,075,387	+	hisD	OKGIIK_04950	0.87	-3.6
1,075,388	-	hisD	OKGIIK_04950	0.87	-1.5
1,075,388	-	hisD	OKGIIK_04950	0.87	-0.2
1,075,388	-	hisD	OKGIIK_04950	0.87	-2.2
1,075,388	-	hisD	OKGIIK_04950	0.87	-1.5
1,075,388	-	hisD	OKGIIK_04950	0.87	-2.6
1,075,411	+	hisD	OKGIIK_04950	0.89	-2.2
1,075,411	+	hisD	OKGIIK_04950	0.89	-3.5
1,075,412	-	hisD	OKGIIK_04950	0.89	-3.1
1,075,412	-	hisD	OKGIIK_04950	0.89	-3.1
1,075,412	-	hisD	OKGIIK_04950	0.89	-3.0
1,075,462	-				+0.8
1,075,596	+				-3.8
1,075,596	+				-1.5
1,075,596	+				-1.2
1,075,597	-				-3.3
1,075,597	-				-2.5
1,075,597	-				-0.8
1,075,597	-				-2.3
1,075,597	-				+0.8
1,075,597	-				-1.8
1,075,746	+	hisC	OKGIIK_04955	0.18	-1.2
1,075,746	+	hisC	OKGIIK_04955	0.18	-2.2
1,075,746	+	hisC	OKGIIK_04955	0.18	-3.2
1,075,746	+	hisC	OKGIIK_04955	0.18	-1.8
1,075,747	-	hisC	OKGIIK_04955	0.18	-2.6
1,075,747	-	hisC	OKGIIK_04955	0.18	-1.5
1,075,747	-	hisC	OKGIIK_04955	0.18	-3.3
1,075,843	+	hisC	OKGIIK_04955	0.27	-4.6
1,075,843	+	hisC	OKGIIK_04955	0.27	-2.6
1,075,844	-	hisC	OKGIIK_04955	0.27	-4.8
1,075,844	-	hisC	OKGIIK_04955	0.27	-2.6
1,075,872	+	hisC	OKGIIK_04955	0.30	-1.5
1,075,872	+	hisC	OKGIIK_04955	0.30	-0.8
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.3
1,075,872	+	hisC	OKGIIK_04955	0.30	-1.5
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.3
1,075,872	+	hisC	OKGIIK_04955	0.30	-1.2
1,075,872	+	hisC	OKGIIK_04955	0.30	-3.3
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.9
1,075,872	+	hisC	OKGIIK_04955	0.30	-3.3
1,075,872	+	hisC	OKGIIK_04955	0.30	-0.8
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.0
1,075,872	+	hisC	OKGIIK_04955	0.30	-0.8
1,075,872	+	hisC	OKGIIK_04955	0.30	-4.5
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.8
1,075,872	+	hisC	OKGIIK_04955	0.30	-1.2
1,075,872	+	hisC	OKGIIK_04955	0.30	-1.5
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.8
1,075,872	+	hisC	OKGIIK_04955	0.30	-0.2
1,075,872	+	hisC	OKGIIK_04955	0.30	-2.5
1,075,873	-	hisC	OKGIIK_04955	0.30	-1.2
1,075,873	-	hisC	OKGIIK_04955	0.30	-3.6
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.0
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.2
1,075,873	-	hisC	OKGIIK_04955	0.30	-1.2
1,075,873	-	hisC	OKGIIK_04955	0.30	-0.2
1,075,873	-	hisC	OKGIIK_04955	0.30	-1.2
1,075,873	-	hisC	OKGIIK_04955	0.30	-1.8
1,075,873	-	hisC	OKGIIK_04955	0.30	-0.2
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.3
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.0
1,075,873	-	hisC	OKGIIK_04955	0.30	-1.8
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.0
1,075,873	-	hisC	OKGIIK_04955	0.30	-2.8
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.8
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.2
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.5
1,076,097	+	hisC	OKGIIK_04955	0.50	-0.8
1,076,097	+	hisC	OKGIIK_04955	0.50	-0.8
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.3
1,076,097	+	hisC	OKGIIK_04955	0.50	-4.5
1,076,097	+	hisC	OKGIIK_04955	0.50	-3.0
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.8
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.0
1,076,097	+	hisC	OKGIIK_04955	0.50	-3.8
1,076,097	+	hisC	OKGIIK_04955	0.50	-0.8
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.3
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.5
1,076,097	+	hisC	OKGIIK_04955	0.50	-3.0
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.2
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.0
1,076,097	+	hisC	OKGIIK_04955	0.50	-3.3
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.3
1,076,097	+	hisC	OKGIIK_04955	0.50	-2.6
1,076,097	+	hisC	OKGIIK_04955	0.50	-1.5
1,076,097	+	hisC	OKGIIK_04955	0.50	-0.2
1,076,098	-	hisC	OKGIIK_04955	0.50	+0.8
1,076,098	-	hisC	OKGIIK_04955	0.50	-2.6
1,076,098	-	hisC	OKGIIK_04955	0.50	-3.0
1,076,098	-	hisC	OKGIIK_04955	0.50	-2.0
1,076,098	-	hisC	OKGIIK_04955	0.50	-3.1
1,076,098	-	hisC	OKGIIK_04955	0.50	-3.2
1,076,098	-	hisC	OKGIIK_04955	0.50	-2.0
1,076,098	-	hisC	OKGIIK_04955	0.50	-3.7
1,076,098	-	hisC	OKGIIK_04955	0.50	+0.8
1,076,098	-	hisC	OKGIIK_04955	0.50	-1.5
1,076,098	-	hisC	OKGIIK_04955	0.50	-2.3
1,076,204	+	hisC	OKGIIK_04955	0.60	-1.5
1,076,443	+	hisC	OKGIIK_04955	0.82	-1.5
1,076,443	+	hisC	OKGIIK_04955	0.82	-2.2
1,076,444	-	hisC	OKGIIK_04955	0.82	-1.6
1,076,444	-	hisC	OKGIIK_04955	0.82	-2.8
1,076,444	-	hisC	OKGIIK_04955	0.82	-1.8
1,076,444	-	hisC	OKGIIK_04955	0.82	-2.3
1,076,587	+				-0.6
1,076,587	+				-0.2
1,076,588	-				-0.9
1,076,588	-				-2.2
1,076,652	+				+0.3
1,076,652	+				+1.2
1,076,652	+				-0.2
1,076,653	-				-0.8
1,076,653	-				-0.7
1,076,653	-				-0.8
1,076,653	-				-1.4
1,076,653	-				+0.1
1,076,653	-				-1.5
1,076,653	-				+0.8
1,076,714	+				-0.8
1,076,714	+				-3.4
1,076,714	+				-3.3
1,076,715	-				-0.2
1,076,715	-				-2.9
1,076,715	-				-1.5
1,076,975	+	hisB	OKGIIK_04960	0.32	-0.2
1,076,975	+	hisB	OKGIIK_04960	0.32	-1.8
1,076,975	+	hisB	OKGIIK_04960	0.32	-1.8
1,076,976	-	hisB	OKGIIK_04960	0.32	-1.4
1,076,976	-	hisB	OKGIIK_04960	0.32	-0.8
1,076,976	-	hisB	OKGIIK_04960	0.32	-4.1
1,077,467	+	hisB	OKGIIK_04960	0.78	-1.5
1,077,467	+	hisB	OKGIIK_04960	0.78	-1.2
1,077,467	+	hisB	OKGIIK_04960	0.78	-3.6
1,077,467	+	hisB	OKGIIK_04960	0.78	-3.2
1,077,467	+	hisB	OKGIIK_04960	0.78	-2.9
1,077,467	+	hisB	OKGIIK_04960	0.78	-3.1
1,077,467	+	hisB	OKGIIK_04960	0.78	-2.3
1,077,467	+	hisB	OKGIIK_04960	0.78	-3.0
1,077,468	-	hisB	OKGIIK_04960	0.78	-2.3
1,077,468	-	hisB	OKGIIK_04960	0.78	-1.8
1,077,468	-	hisB	OKGIIK_04960	0.78	-0.2
1,077,468	-	hisB	OKGIIK_04960	0.78	-2.0
1,077,468	-	hisB	OKGIIK_04960	0.78	-2.2
1,077,468	-	hisB	OKGIIK_04960	0.78	-1.8
1,077,468	-	hisB	OKGIIK_04960	0.78	-1.8
1,077,468	-	hisB	OKGIIK_04960	0.78	-3.1
1,077,504	+	hisB	OKGIIK_04960	0.81	-2.6
1,077,505	-	hisB	OKGIIK_04960	0.81	-2.0