Strain Fitness in Escherichia coli ECRC101 around MCAODC_08310

Experiment: WM_EV219

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_EV219
1,664,834	+				+0.8
1,664,835	-				+0.9
1,664,835	-				+0.3
1,664,838	+				+0.1
1,664,924	-	yhcO	MCAODC_08300	0.35	-0.2
1,664,954	-	yhcO	MCAODC_08300	0.46	-0.5
1,665,034	+	yhcO	MCAODC_08300	0.75	-2.5
1,665,037	+	yhcO	MCAODC_08300	0.76	-0.8
1,665,037	+	yhcO	MCAODC_08300	0.76	+1.2
1,665,038	-	yhcO	MCAODC_08300	0.77	-0.0
1,665,086	+				-0.2
1,665,086	+				+0.7
1,665,087	-				-0.4
1,665,087	-				+0.8
1,665,087	-				-0.4
1,665,158	+				+0.1
1,665,158	+				-0.4
1,665,159	-				-0.3
1,665,164	+				-0.4
1,665,165	-				+0.7
1,665,165	-				-2.5
1,665,165	-				-0.3
1,665,211	-	yhcN	MCAODC_08305	0.20	-0.0
1,665,219	-	yhcN	MCAODC_08305	0.23	-0.5
1,665,267	+	yhcN	MCAODC_08305	0.42	+0.5
1,665,296	-	yhcN	MCAODC_08305	0.53	-0.0
1,665,391	+	yhcN	MCAODC_08305	0.89	-0.7
1,665,391	+	yhcN	MCAODC_08305	0.89	+1.0
1,665,392	-	yhcN	MCAODC_08305	0.89	+0.3
1,665,392	-	yhcN	MCAODC_08305	0.89	-0.0
1,665,437	+				+0.6
1,665,445	+				-0.4
1,665,472	-				-1.4
1,665,488	+				+0.3
1,665,561	+				+1.3
1,665,657	-				-1.0
1,665,657	-				+0.1
1,665,860	-	argR	MCAODC_08310	0.16	-1.3
1,665,936	-	argR	MCAODC_08310	0.32	-0.1
1,666,032	-	argR	MCAODC_08310	0.52	-0.6
1,666,084	+	argR	MCAODC_08310	0.63	-0.0
1,666,089	-	argR	MCAODC_08310	0.65	-0.7
1,666,123	+	argR	MCAODC_08310	0.72	+0.3
1,666,124	-	argR	MCAODC_08310	0.72	-0.7
1,666,124	-	argR	MCAODC_08310	0.72	+0.2
1,666,124	-	argR	MCAODC_08310	0.72	-2.3
1,666,132	+	argR	MCAODC_08310	0.74	+0.4
1,666,132	+	argR	MCAODC_08310	0.74	-0.4
1,666,135	+	argR	MCAODC_08310	0.74	-0.1
1,666,135	+	argR	MCAODC_08310	0.74	-1.1
1,666,136	-	argR	MCAODC_08310	0.75	+0.0
1,666,201	+	argR	MCAODC_08310	0.88	+0.2
1,666,202	-	argR	MCAODC_08310	0.89	-0.7
1,666,205	+	argR	MCAODC_08310	0.89	-0.4
1,666,213	+				+2.3
1,666,222	+				+0.4
1,666,223	-				-1.6
1,666,227	-				-0.1
1,666,255	+				-0.2
1,666,255	+				+0.3
1,666,255	+				+1.2
1,666,256	-				+1.3
1,666,256	-				+0.6
1,666,256	-				-2.2
1,666,256	-				+1.7
1,666,256	-				-0.8
1,666,256	-				-1.0
1,666,279	+				+1.6
1,666,279	+				+0.0
1,666,280	-				-0.2
1,666,280	-				-0.4
1,666,280	-				+1.6
1,666,280	-				+0.2
1,666,287	+				+0.7
1,666,288	-				-0.7
1,666,288	-				+1.3
1,666,288	-				+0.1
1,666,343	+				-0.3
1,666,343	+				+0.3
1,666,344	-				-0.1
1,666,390	+				-0.1
1,666,391	-				+0.5
1,666,391	-				-1.1
1,666,474	+				+0.3
1,666,474	+				+0.6
1,666,474	+				+0.1
1,666,474	+				-0.1
1,666,475	-				+0.4
1,666,475	-				-0.2
1,666,475	-				-0.2
1,666,475	-				-0.3
1,666,476	+				-0.8
1,666,476	+				+0.9
1,666,476	+				+2.9
1,666,476	+				-0.8
1,666,476	+				+0.2
1,666,476	+				-0.6
1,666,476	+				+0.1
1,666,477	-				-1.6
1,666,477	-				+0.6
1,666,477	-				+1.4
1,666,477	-				+0.1
1,666,505	+				+0.2
1,666,513	-				+0.1
1,666,524	-				+0.5
1,666,531	+				+0.4
1,666,536	+				-0.4
1,666,536	+				+0.1
1,666,536	+				-2.3
1,666,536	+				+0.9
1,666,536	+				+2.0
1,666,536	+				-0.5
1,666,537	-				+0.7
1,666,537	-				+0.6
1,666,537	-				-2.1
1,666,537	-				+0.2
1,666,537	-				-0.3
1,666,537	-				-2.0
1,666,537	-				-1.1
1,666,557	+				+1.1
1,666,557	+				-0.0
1,666,586	+				-1.2
1,666,586	+				+0.1
1,666,656	+				+0.2
1,666,657	-				+0.9
1,666,657	-				+0.3
1,666,661	+				-0.5
1,666,662	-				-0.3
1,666,667	-				+1.2
1,666,672	+				+0.3
1,666,674	+				+2.3
1,666,674	+				+0.1
1,666,674	+				+0.2
1,666,675	-				+0.2
1,666,675	-				+2.4
1,666,677	+				-1.6
1,666,678	-				+0.3
1,666,743	-				+0.1
1,666,787	-	mdh	MCAODC_08315	0.10	-0.7
1,666,912	-	mdh	MCAODC_08315	0.24	+0.0
1,666,925	+	mdh	MCAODC_08315	0.25	-0.1
1,666,941	+	mdh	MCAODC_08315	0.27	-0.3
1,666,962	+	mdh	MCAODC_08315	0.29	+0.8
1,666,962	+	mdh	MCAODC_08315	0.29	+0.6
1,666,963	-	mdh	MCAODC_08315	0.29	-0.1
1,667,037	+	mdh	MCAODC_08315	0.37	-1.9
1,667,037	+	mdh	MCAODC_08315	0.37	+0.8
1,667,043	+	mdh	MCAODC_08315	0.38	+1.7
1,667,101	+	mdh	MCAODC_08315	0.44	-0.4
1,667,127	+	mdh	MCAODC_08315	0.47	-0.4
1,667,140	-	mdh	MCAODC_08315	0.48	-1.7
1,667,208	+	mdh	MCAODC_08315	0.55	+0.2
1,667,229	+	mdh	MCAODC_08315	0.57	-1.1
1,667,229	+	mdh	MCAODC_08315	0.57	-0.6