Strain Fitness in Escherichia coli ECRC101 around MCAODC_13755

Experiment: WM_Lambda

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntcvpA and purF are separated by 36 nucleotidespurF and ubiX are separated by 94 nucleotidesubiX and argT are separated by 265 nucleotides MCAODC_13750: cvpA - colicin V production protein, at 2,690,787 to 2,691,275 cvpA MCAODC_13755: purF - amidophosphoribosyltransferase, at 2,691,312 to 2,692,829 purF MCAODC_13760: ubiX - flavin prenyltransferase UbiX, at 2,692,924 to 2,693,493 ubiX MCAODC_13765: argT - lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT, at 2,693,759 to 2,694,541 argT Position (kb) 2691 2692 2693Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2 3at 2690.399 kb on + strandat 2690.491 kb on - strandat 2690.491 kb on - strandat 2690.499 kb on - strandat 2690.581 kb on + strandat 2690.607 kb on + strandat 2690.738 kb on + strandat 2690.786 kb on + strandat 2690.786 kb on + strandat 2690.787 kb on - strandat 2690.916 kb on + strand, within cvpAat 2690.919 kb on + strand, within cvpAat 2690.920 kb on - strand, within cvpAat 2690.920 kb on - strand, within cvpAat 2690.925 kb on + strand, within cvpAat 2691.131 kb on + strand, within cvpAat 2691.131 kb on + strand, within cvpAat 2691.185 kb on + strand, within cvpAat 2691.215 kb on + strand, within cvpAat 2691.237 kb on + strandat 2691.273 kb on + strandat 2691.274 kb on - strandat 2691.295 kb on - strandat 2691.311 kb on + strandat 2691.311 kb on + strandat 2691.311 kb on + strandat 2691.311 kb on + strandat 2691.311 kb on + strandat 2691.311 kb on + strandat 2691.341 kb on + strandat 2691.363 kb on + strandat 2691.364 kb on - strandat 2691.421 kb on + strandat 2691.421 kb on + strandat 2691.421 kb on + strandat 2691.421 kb on + strandat 2691.421 kb on + strandat 2691.421 kb on + strandat 2691.421 kb on + strandat 2691.422 kb on - strandat 2691.422 kb on - strandat 2691.422 kb on - strandat 2691.475 kb on + strand, within purFat 2691.475 kb on + strand, within purFat 2691.476 kb on - strand, within purFat 2691.476 kb on - strand, within purFat 2691.476 kb on - strand, within purFat 2691.492 kb on - strand, within purFat 2691.579 kb on + strand, within purFat 2691.580 kb on - strand, within purFat 2691.585 kb on - strand, within purFat 2691.585 kb on - strand, within purFat 2691.602 kb on + strand, within purFat 2691.602 kb on + strand, within purFat 2691.711 kb on - strand, within purFat 2691.711 kb on - strand, within purFat 2691.713 kb on + strand, within purFat 2691.714 kb on - strand, within purFat 2691.714 kb on - strand, within purFat 2691.789 kb on - strand, within purFat 2691.813 kb on + strand, within purFat 2691.813 kb on + strand, within purFat 2691.813 kb on + strand, within purFat 2691.814 kb on - strand, within purFat 2691.834 kb on - strand, within purFat 2691.846 kb on - strand, within purFat 2691.924 kb on + strand, within purFat 2691.924 kb on + strand, within purFat 2691.925 kb on - strand, within purFat 2691.925 kb on - strand, within purFat 2691.925 kb on - strand, within purFat 2691.925 kb on - strand, within purFat 2691.925 kb on - strand, within purFat 2691.926 kb on + strand, within purFat 2691.926 kb on + strand, within purFat 2691.926 kb on + strand, within purFat 2691.927 kb on - strand, within purFat 2692.006 kb on - strand, within purFat 2692.006 kb on - strand, within purFat 2692.080 kb on + strand, within purFat 2692.081 kb on - strand, within purFat 2692.081 kb on - strand, within purFat 2692.081 kb on - strand, within purFat 2692.081 kb on - strand, within purFat 2692.084 kb on + strand, within purFat 2692.084 kb on + strand, within purFat 2692.084 kb on + strand, within purFat 2692.084 kb on + strand, within purFat 2692.084 kb on + strand, within purFat 2692.084 kb on + strand, within purFat 2692.085 kb on - strand, within purFat 2692.086 kb on + strand, within purFat 2692.086 kb on + strand, within purFat 2692.086 kb on + strand, within purFat 2692.086 kb on + strand, within purFat 2692.087 kb on - strand, within purFat 2692.087 kb on - strand, within purFat 2692.087 kb on - strand, within purFat 2692.359 kb on - strand, within purFat 2692.419 kb on - strand, within purFat 2692.486 kb on - strand, within purFat 2692.486 kb on - strand, within purFat 2692.527 kb on + strand, within purFat 2692.528 kb on - strand, within purFat 2692.539 kb on - strand, within purFat 2692.539 kb on - strand, within purFat 2692.708 kb on - strandat 2692.734 kb on + strandat 2692.735 kb on - strandat 2692.756 kb on + strandat 2692.757 kb on - strandat 2692.757 kb on - strandat 2692.760 kb on + strandat 2692.761 kb on - strandat 2692.919 kb on + strandat 2692.919 kb on + strandat 2693.593 kb on + strandat 2693.600 kb on + strandat 2693.600 kb on + strandat 2693.601 kb on - strandat 2693.613 kb on - strandat 2693.680 kb on + strandat 2693.680 kb on + strandat 2693.719 kb on + strandat 2693.719 kb on + strandat 2693.720 kb on - strandat 2693.720 kb on - strandat 2693.728 kb on + strandat 2693.754 kb on + strandat 2693.754 kb on + strandat 2693.758 kb on + strandat 2693.758 kb on + strandat 2693.759 kb on - strandat 2693.820 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction WM_Lambda
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2,690,399 + +0.8
2,690,491 - +0.0
2,690,491 - +0.9
2,690,499 - +0.6
2,690,581 + +0.7
2,690,607 + +0.1
2,690,738 + -1.6
2,690,786 + -1.5
2,690,786 + -1.6
2,690,787 - +0.4
2,690,916 + cvpA MCAODC_13750 0.26 -1.1
2,690,919 + cvpA MCAODC_13750 0.27 -1.2
2,690,920 - cvpA MCAODC_13750 0.27 -0.5
2,690,920 - cvpA MCAODC_13750 0.27 -2.3
2,690,925 + cvpA MCAODC_13750 0.28 -2.5
2,691,131 + cvpA MCAODC_13750 0.70 -2.8
2,691,131 + cvpA MCAODC_13750 0.70 -2.2
2,691,185 + cvpA MCAODC_13750 0.81 -0.6
2,691,215 + cvpA MCAODC_13750 0.88 -2.9
2,691,237 + -1.0
2,691,273 + +0.7
2,691,274 - -1.5
2,691,295 - -1.1
2,691,311 + -3.3
2,691,311 + -4.0
2,691,311 + -5.8
2,691,311 + +0.1
2,691,311 + -3.1
2,691,311 + -3.0
2,691,341 + -1.7
2,691,363 + -2.6
2,691,364 - -2.0
2,691,421 + -3.1
2,691,421 + -2.7
2,691,421 + -4.8
2,691,421 + -1.8
2,691,421 + -4.7
2,691,421 + -3.2
2,691,421 + -3.8
2,691,422 - -2.0
2,691,422 - -3.2
2,691,422 - -2.8
2,691,475 + purF MCAODC_13755 0.11 -2.7
2,691,475 + purF MCAODC_13755 0.11 -4.4
2,691,476 - purF MCAODC_13755 0.11 -2.9
2,691,476 - purF MCAODC_13755 0.11 -3.8
2,691,476 - purF MCAODC_13755 0.11 -1.3
2,691,492 - purF MCAODC_13755 0.12 -1.0
2,691,579 + purF MCAODC_13755 0.18 -3.1
2,691,580 - purF MCAODC_13755 0.18 -3.7
2,691,585 - purF MCAODC_13755 0.18 -2.0
2,691,585 - purF MCAODC_13755 0.18 -0.6
2,691,602 + purF MCAODC_13755 0.19 -2.3
2,691,602 + purF MCAODC_13755 0.19 -2.4
2,691,711 - purF MCAODC_13755 0.26 -2.4
2,691,711 - purF MCAODC_13755 0.26 -5.4
2,691,713 + purF MCAODC_13755 0.26 -2.4
2,691,714 - purF MCAODC_13755 0.26 -2.0
2,691,714 - purF MCAODC_13755 0.26 -2.7
2,691,789 - purF MCAODC_13755 0.31 -3.3
2,691,813 + purF MCAODC_13755 0.33 -2.9
2,691,813 + purF MCAODC_13755 0.33 -2.0
2,691,813 + purF MCAODC_13755 0.33 -4.3
2,691,814 - purF MCAODC_13755 0.33 -3.5
2,691,834 - purF MCAODC_13755 0.34 -4.1
2,691,846 - purF MCAODC_13755 0.35 -1.5
2,691,924 + purF MCAODC_13755 0.40 +3.4
2,691,924 + purF MCAODC_13755 0.40 -3.6
2,691,925 - purF MCAODC_13755 0.40 -3.4
2,691,925 - purF MCAODC_13755 0.40 -1.8
2,691,925 - purF MCAODC_13755 0.40 +0.4
2,691,925 - purF MCAODC_13755 0.40 +1.9
2,691,925 - purF MCAODC_13755 0.40 +0.2
2,691,926 + purF MCAODC_13755 0.40 -4.8
2,691,926 + purF MCAODC_13755 0.40 -3.4
2,691,926 + purF MCAODC_13755 0.40 -2.4
2,691,927 - purF MCAODC_13755 0.41 -4.5
2,692,006 - purF MCAODC_13755 0.46 -3.1
2,692,006 - purF MCAODC_13755 0.46 -3.0
2,692,080 + purF MCAODC_13755 0.51 -3.1
2,692,081 - purF MCAODC_13755 0.51 -0.3
2,692,081 - purF MCAODC_13755 0.51 -1.3
2,692,081 - purF MCAODC_13755 0.51 -3.3
2,692,081 - purF MCAODC_13755 0.51 -1.1
2,692,084 + purF MCAODC_13755 0.51 -3.1
2,692,084 + purF MCAODC_13755 0.51 -3.4
2,692,084 + purF MCAODC_13755 0.51 -3.2
2,692,084 + purF MCAODC_13755 0.51 -0.7
2,692,084 + purF MCAODC_13755 0.51 -2.1
2,692,084 + purF MCAODC_13755 0.51 -3.9
2,692,085 - purF MCAODC_13755 0.51 -2.4
2,692,086 + purF MCAODC_13755 0.51 -2.7
2,692,086 + purF MCAODC_13755 0.51 -2.6
2,692,086 + purF MCAODC_13755 0.51 -3.2
2,692,086 + purF MCAODC_13755 0.51 -2.6
2,692,087 - purF MCAODC_13755 0.51 -3.3
2,692,087 - purF MCAODC_13755 0.51 -1.6
2,692,087 - purF MCAODC_13755 0.51 -2.5
2,692,359 - purF MCAODC_13755 0.69 -0.8
2,692,419 - purF MCAODC_13755 0.73 -0.6
2,692,486 - purF MCAODC_13755 0.77 -4.4
2,692,486 - purF MCAODC_13755 0.77 -1.1
2,692,527 + purF MCAODC_13755 0.80 -2.3
2,692,528 - purF MCAODC_13755 0.80 -3.8
2,692,539 - purF MCAODC_13755 0.81 -2.0
2,692,539 - purF MCAODC_13755 0.81 -1.1
2,692,708 - -4.1
2,692,734 + -0.0
2,692,735 - -3.2
2,692,756 + -0.7
2,692,757 - -3.4
2,692,757 - -1.2
2,692,760 + -3.4
2,692,761 - -2.2
2,692,919 + -1.6
2,692,919 + -0.4
2,693,593 + -0.5
2,693,600 + +0.6
2,693,600 + -0.0
2,693,601 - +0.3
2,693,613 - +0.3
2,693,680 + -0.4
2,693,680 + +0.0
2,693,719 + +0.0
2,693,719 + +0.7
2,693,720 - -0.3
2,693,720 - -0.3
2,693,728 + +0.9
2,693,754 + +1.4
2,693,754 + +0.6
2,693,758 + +0.6
2,693,758 + -0.0
2,693,759 - +1.3
2,693,820 - +0.2

Or see this region's nucleotide sequence