Strain Fitness in Escherichia coli ECRC101 around MCAODC_05850

Experiment: WM_Lambda

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Lambda
1,174,256	-	escC	MCAODC_05840	0.65	+1.0
1,174,279	+	escC	MCAODC_05840	0.66	-0.2
1,174,319	-	escC	MCAODC_05840	0.69	+1.0
1,174,638	+	escC	MCAODC_05840	0.90	+2.5
1,175,095	-	sepD	MCAODC_05845	0.66	+0.8
1,175,099	-	sepD	MCAODC_05845	0.67	+0.7
1,175,238	+				-0.5
1,175,254	+				-1.4
1,175,255	-				+0.2
1,175,325	-	escJ	MCAODC_05850	0.12	-1.0
1,175,364	+	escJ	MCAODC_05850	0.19	-0.5
1,175,436	+	escJ	MCAODC_05850	0.31	-1.9
1,175,746	-	escJ	MCAODC_05850	0.86	-0.4
1,175,789	+				-1.9
1,176,074	+	escI	MCAODC_05855	0.64	-0.6
1,176,075	-	escI	MCAODC_05855	0.65	+0.4
1,176,213	-				-0.2
1,176,261	-				-0.4
1,176,331	-	espZ	MCAODC_05860	0.13	+0.1
1,176,336	+	espZ	MCAODC_05860	0.15	-0.1
1,176,336	+	espZ	MCAODC_05860	0.15	-0.0
1,176,340	+	espZ	MCAODC_05860	0.16	-0.2
1,176,340	+	espZ	MCAODC_05860	0.16	-1.0
1,176,341	-	espZ	MCAODC_05860	0.16	-0.1
1,176,341	-	espZ	MCAODC_05860	0.16	-0.8
1,176,341	-	espZ	MCAODC_05860	0.16	-0.2
1,176,341	-	espZ	MCAODC_05860	0.16	-0.5
1,176,368	-	espZ	MCAODC_05860	0.25	-1.1
1,176,371	+	espZ	MCAODC_05860	0.26	-3.0
1,176,371	+	espZ	MCAODC_05860	0.26	-0.5
1,176,442	-	espZ	MCAODC_05860	0.50	+0.0
1,176,442	-	espZ	MCAODC_05860	0.50	+0.8
1,176,458	-	espZ	MCAODC_05860	0.55	+0.2
1,176,574	+				-0.4
1,176,574	+				+0.4
1,176,698	+				-0.1
1,176,703	-				+0.1
1,176,709	+				+0.4