Strain Fitness in Escherichia coli ECRC101 around MCAODC_11930

Experiment: Bas14

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas14
2,356,467	-	rseB	MCAODC_11915	0.67	+1.8
2,356,479	+	rseB	MCAODC_11915	0.68	-0.1
2,356,518	+	rseB	MCAODC_11915	0.72	-0.7
2,356,585	+	rseB	MCAODC_11915	0.79	+1.6
2,356,680	+	rseB	MCAODC_11915	0.89	+2.2
2,356,680	+	rseB	MCAODC_11915	0.89	-0.4
2,356,680	+	rseB	MCAODC_11915	0.89	-0.5
2,356,688	+				-0.6
2,356,688	+				-0.2
2,356,689	-				-0.7
2,356,689	-				-0.1
2,356,758	+				-1.5
2,356,758	+				-0.2
2,356,761	+				-1.8
2,356,762	-				+0.2
2,356,762	-				-2.5
2,356,926	-	rseC	MCAODC_11925	0.31	-0.5
2,356,926	-	rseC	MCAODC_11925	0.31	-2.0
2,356,937	-	rseC	MCAODC_11925	0.33	+0.5
2,356,937	-	rseC	MCAODC_11925	0.33	-1.4
2,357,004	-	rseC	MCAODC_11925	0.47	-0.3
2,357,004	-	rseC	MCAODC_11925	0.47	-1.6
2,357,004	-	rseC	MCAODC_11925	0.47	-3.1
2,357,014	+	rseC	MCAODC_11925	0.49	-0.5
2,357,014	+	rseC	MCAODC_11925	0.49	-0.0
2,357,022	+	rseC	MCAODC_11925	0.51	+0.2
2,357,022	+	rseC	MCAODC_11925	0.51	+0.2
2,357,022	+	rseC	MCAODC_11925	0.51	-2.7
2,357,023	-	rseC	MCAODC_11925	0.51	+0.2
2,357,023	-	rseC	MCAODC_11925	0.51	-0.1
2,357,024	+	rseC	MCAODC_11925	0.51	+0.5
2,357,024	+	rseC	MCAODC_11925	0.51	-0.9
2,357,024	+	rseC	MCAODC_11925	0.51	+0.8
2,357,024	+	rseC	MCAODC_11925	0.51	-2.3
2,357,024	+	rseC	MCAODC_11925	0.51	+0.9
2,357,025	-	rseC	MCAODC_11925	0.51	+0.2
2,357,025	-	rseC	MCAODC_11925	0.51	-0.1
2,357,025	-	rseC	MCAODC_11925	0.51	+1.0
2,357,045	-	rseC	MCAODC_11925	0.55	-1.6
2,357,045	-	rseC	MCAODC_11925	0.55	-0.0
2,357,098	+	rseC	MCAODC_11925	0.66	+0.5
2,357,098	+	rseC	MCAODC_11925	0.66	+0.6
2,357,098	+	rseC	MCAODC_11925	0.66	-1.5
2,357,098	+	rseC	MCAODC_11925	0.66	-1.7
2,357,099	-	rseC	MCAODC_11925	0.67	-1.5
2,357,099	-	rseC	MCAODC_11925	0.67	-3.2
2,357,099	-	rseC	MCAODC_11925	0.67	-0.7
2,357,156	+	rseC	MCAODC_11925	0.79	-0.8
2,357,195	-	rseC	MCAODC_11925	0.87	-2.1
2,357,328	-				-0.7
2,357,354	+				+0.3
2,357,354	+				+0.2
2,357,355	-				+1.1
2,357,355	-				+1.0
2,357,359	+				+1.6
2,357,375	+				-2.2
2,357,381	+				+0.3
2,357,411	+				-0.2
2,357,444	+				-0.5
2,357,444	+				-0.3
2,357,450	+				+1.1
2,357,450	+				+0.6
2,357,484	+				-0.6
2,358,062	+	lepA	MCAODC_11930	0.34	-1.8
2,358,149	+	lepA	MCAODC_11930	0.39	-0.4
2,358,231	+	lepA	MCAODC_11930	0.43	-1.6
2,358,341	+	lepA	MCAODC_11930	0.49	+2.1
2,358,341	+	lepA	MCAODC_11930	0.49	-0.9
2,358,709	+	lepA	MCAODC_11930	0.70	-1.2
2,358,863	+	lepA	MCAODC_11930	0.78	-2.4
2,358,865	+	lepA	MCAODC_11930	0.78	+2.1
2,358,903	+	lepA	MCAODC_11930	0.80	-1.8
2,359,115	+				+1.0
2,359,115	+				-1.2
2,360,220	+				-1.1
2,360,244	-				-0.5
2,360,246	+				-0.7
2,360,246	+				+0.6
2,360,246	+				-1.7
2,360,247	-				+0.0