Strain Fitness in Escherichia coli ECRC101 around MCAODC_09775

Experiment: Bas14

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas14
1,946,610	+				-2.2
1,946,611	-				-2.8
1,946,616	-				-3.3
1,946,619	+				+1.0
1,946,620	-				-0.2
1,946,620	-				-0.8
1,946,620	-				-1.2
1,946,623	+				-1.6
1,946,628	-				-0.1
1,946,823	-	yggU	MCAODC_09765	0.70	+0.7
1,946,834	-	yggU	MCAODC_09765	0.74	-0.2
1,946,834	-	yggU	MCAODC_09765	0.74	+0.7
1,946,834	-	yggU	MCAODC_09765	0.74	-0.5
1,946,834	-	yggU	MCAODC_09765	0.74	+0.8
1,946,860	+	yggU	MCAODC_09765	0.83	-0.2
1,946,861	+	yggU	MCAODC_09765	0.84	-3.2
1,946,861	-	yggU	MCAODC_09765	0.84	-0.7
1,946,862	+	yggU	MCAODC_09765	0.84	-0.4
1,946,862	+	yggU	MCAODC_09765	0.84	+0.2
1,946,863	-	yggU	MCAODC_09765	0.84	-1.2
1,946,863	-	yggU	MCAODC_09765	0.84	-0.2
1,946,863	-	yggU	MCAODC_09765	0.84	-0.2
1,946,891	-				+0.7
1,946,957	-				+0.5
1,946,957	-				+0.8
1,946,985	-	yggT	MCAODC_09770	0.14	-2.1
1,946,985	-	yggT	MCAODC_09770	0.14	+0.6
1,947,090	-	yggT	MCAODC_09770	0.33	+1.0
1,947,127	-	yggT	MCAODC_09770	0.39	+0.9
1,947,263	+	yggT	MCAODC_09770	0.63	-1.8
1,947,409	+	yggT	MCAODC_09770	0.89	-0.8
1,947,549	-				-1.6
1,947,549	-				-0.8
1,947,640	-	yggS	MCAODC_09775	0.21	-0.7
1,947,672	+	yggS	MCAODC_09775	0.26	-0.9
1,947,672	+	yggS	MCAODC_09775	0.26	-1.2
1,947,672	+	yggS	MCAODC_09775	0.26	-2.3
1,947,676	+	yggS	MCAODC_09775	0.27	-0.1
1,947,677	-	yggS	MCAODC_09775	0.27	-0.6
1,947,677	-	yggS	MCAODC_09775	0.27	-0.1
1,947,721	-	yggS	MCAODC_09775	0.33	-1.0
1,947,785	+	yggS	MCAODC_09775	0.42	-0.7
1,947,800	+	yggS	MCAODC_09775	0.44	-0.8
1,947,825	-	yggS	MCAODC_09775	0.48	-1.2
1,947,890	+	yggS	MCAODC_09775	0.57	-1.2
1,947,890	+	yggS	MCAODC_09775	0.57	-2.2
1,947,890	+	yggS	MCAODC_09775	0.57	-1.8
1,947,891	-	yggS	MCAODC_09775	0.57	-2.7
1,947,891	-	yggS	MCAODC_09775	0.57	-0.4
1,947,929	+	yggS	MCAODC_09775	0.62	-1.2
1,947,950	+	yggS	MCAODC_09775	0.65	+0.2
1,947,963	+	yggS	MCAODC_09775	0.67	+0.6
1,947,964	-	yggS	MCAODC_09775	0.67	-2.2
1,948,005	+	yggS	MCAODC_09775	0.73	+0.2
1,948,022	-	yggS	MCAODC_09775	0.76	-0.8
1,948,022	-	yggS	MCAODC_09775	0.76	-4.1
1,948,088	+	yggS	MCAODC_09775	0.85	+3.3
1,948,107	-	yggS	MCAODC_09775	0.88	-1.7
1,948,207	+				-1.3
1,948,208	-				-2.7
1,948,208	-				-0.1
1,948,208	-				-0.3
1,948,243	-				-0.5
1,948,249	+				+2.2
1,948,249	+				-0.0
1,948,263	+				-2.2
1,948,264	-				+0.5
1,948,264	-				+0.9
1,948,264	-				+1.6
1,948,350	+	yggR	MCAODC_09780	0.14	-3.0
1,948,387	-	yggR	MCAODC_09780	0.18	+0.9
1,948,488	+	yggR	MCAODC_09780	0.28	+1.5
1,948,498	-	yggR	MCAODC_09780	0.29	-1.4
1,948,554	+	yggR	MCAODC_09780	0.35	-0.1
1,948,613	-	yggR	MCAODC_09780	0.41	-0.1
1,948,663	+	yggR	MCAODC_09780	0.46	-0.1
1,948,664	-	yggR	MCAODC_09780	0.46	-2.2
1,948,692	-	yggR	MCAODC_09780	0.49	-1.1
1,948,697	+	yggR	MCAODC_09780	0.50	+1.3
1,948,697	+	yggR	MCAODC_09780	0.50	+0.2
1,948,698	-	yggR	MCAODC_09780	0.50	+0.2
1,948,747	+	yggR	MCAODC_09780	0.55	-0.6
1,948,747	+	yggR	MCAODC_09780	0.55	+0.0
1,948,747	+	yggR	MCAODC_09780	0.55	+0.4
1,948,884	+	yggR	MCAODC_09780	0.69	+0.0
1,948,884	+	yggR	MCAODC_09780	0.69	+0.6
1,948,885	-	yggR	MCAODC_09780	0.69	+0.9
1,948,885	-	yggR	MCAODC_09780	0.69	+1.0
1,948,885	-	yggR	MCAODC_09780	0.69	-0.1
1,948,885	-	yggR	MCAODC_09780	0.69	+2.8
1,948,885	-	yggR	MCAODC_09780	0.69	-0.4
1,948,885	-	yggR	MCAODC_09780	0.69	-1.4
1,948,885	-	yggR	MCAODC_09780	0.69	-0.3
1,948,888	+	yggR	MCAODC_09780	0.69	+0.6
1,948,888	+	yggR	MCAODC_09780	0.69	+1.1
1,948,888	+	yggR	MCAODC_09780	0.69	+0.7
1,948,888	+	yggR	MCAODC_09780	0.69	+0.8
1,948,888	+	yggR	MCAODC_09780	0.69	-0.1
1,948,888	+	yggR	MCAODC_09780	0.69	-0.4
1,948,888	+	yggR	MCAODC_09780	0.69	+0.2
1,948,888	+	yggR	MCAODC_09780	0.69	+0.2
1,948,889	-	yggR	MCAODC_09780	0.69	+1.1
1,948,889	-	yggR	MCAODC_09780	0.69	+1.1
1,948,889	-	yggR	MCAODC_09780	0.69	+0.0
1,948,889	-	yggR	MCAODC_09780	0.69	+0.8
1,948,889	-	yggR	MCAODC_09780	0.69	-0.2
1,948,889	-	yggR	MCAODC_09780	0.69	-0.5
1,948,975	+	yggR	MCAODC_09780	0.78	+0.5
1,948,975	+	yggR	MCAODC_09780	0.78	+0.7
1,949,037	+	yggR	MCAODC_09780	0.84	+0.5
1,949,113	+				-0.6
1,949,113	+				-2.2
1,949,142	+				+1.5
1,949,160	-				+0.8