Strain Fitness in Escherichia coli ECOR38 around HEPCGN_14750

Experiment: Bas61

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas61
1,708,390	-	yesN	HEPCGN_14740	0.69	+0.2
1,708,405	-	yesN	HEPCGN_14740	0.71	+0.4
1,708,405	-	yesN	HEPCGN_14740	0.71	-0.3
1,708,492	+	yesN	HEPCGN_14740	0.82	+0.1
1,708,496	+	yesN	HEPCGN_14740	0.82	+0.1
1,708,615	-				+0.9
1,708,629	-				-0.8
1,708,683	-				+0.9
1,708,683	-				+0.6
1,708,685	+				+0.0
1,708,685	+				+0.4
1,708,685	+				-0.3
1,708,712	+				+0.3
1,708,713	-				+0.7
1,708,719	+				+1.7
1,708,782	+	araD	HEPCGN_14745	0.16	+0.8
1,708,783	-	araD	HEPCGN_14745	0.16	+1.1
1,708,784	+	araD	HEPCGN_14745	0.16	-2.2
1,708,785	-	araD	HEPCGN_14745	0.16	+0.2
1,708,785	-	araD	HEPCGN_14745	0.16	-0.4
1,708,940	+	araD	HEPCGN_14745	0.39	+1.3
1,708,947	-	araD	HEPCGN_14745	0.40	+0.7
1,708,947	-	araD	HEPCGN_14745	0.40	-0.5
1,709,000	+	araD	HEPCGN_14745	0.47	-1.3
1,709,001	-	araD	HEPCGN_14745	0.47	+0.2
1,709,006	+	araD	HEPCGN_14745	0.48	+0.8
1,709,006	+	araD	HEPCGN_14745	0.48	+0.5
1,709,006	+	araD	HEPCGN_14745	0.48	+0.1
1,709,006	+	araD	HEPCGN_14745	0.48	-0.5
1,709,007	-	araD	HEPCGN_14745	0.48	-0.6
1,709,091	+	araD	HEPCGN_14745	0.60	-0.1
1,709,109	-	araD	HEPCGN_14745	0.63	-0.3
1,709,109	-	araD	HEPCGN_14745	0.63	-0.1
1,709,186	-	araD	HEPCGN_14745	0.74	+1.1
1,709,198	-	araD	HEPCGN_14745	0.76	-0.0
1,709,203	-	araD	HEPCGN_14745	0.76	+0.9
1,709,226	-	araD	HEPCGN_14745	0.80	-0.6
1,709,248	+	araD	HEPCGN_14745	0.83	+0.1
1,709,363	-				+1.3
1,709,363	-				+0.8
1,709,363	-				-0.2
1,709,368	-				+0.1
1,709,368	-				-0.7
1,709,368	-				-0.1
1,709,369	+				-0.8
1,709,388	-				+0.2
1,709,418	-				-0.4
1,709,759	+	sgbU	HEPCGN_14750	0.46	-1.4
1,709,760	-	sgbU	HEPCGN_14750	0.46	-1.1
1,709,861	-	sgbU	HEPCGN_14750	0.58	-0.4
1,710,197	-				-0.2
1,710,197	-				+0.0
1,710,215	+				-1.1
1,710,216	-				-0.0
1,710,337	-	ulaD	HEPCGN_14755	0.19	+2.2
1,710,411	+	ulaD	HEPCGN_14755	0.30	-0.9
1,710,412	-	ulaD	HEPCGN_14755	0.30	-0.1
1,710,412	-	ulaD	HEPCGN_14755	0.30	+0.8
1,710,496	-	ulaD	HEPCGN_14755	0.43	+1.7
1,710,634	-	ulaD	HEPCGN_14755	0.63	-0.6
1,710,876	+				+0.6
1,710,877	-				-0.1
1,710,877	-				-1.2
1,710,877	-				+1.3
1,710,955	+				-0.9
1,711,005	+				+0.0
1,711,005	+				-0.2
1,711,005	+				-0.4
1,711,006	-				+0.1
1,711,197	-	lyxK	HEPCGN_14760	0.22	+0.5