Experiment: Bas61
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt polA and HEPCGN_12790 are separated by 1 nucleotides HEPCGN_12790 and yihG are separated by 119 nucleotides
HEPCGN_12785: polA - DNA polymerase I, at 1,305,958 to 1,308,744
polA
HEPCGN_12790: HEPCGN_12790 - hypothetical protein, at 1,308,746 to 1,308,988
_12790
HEPCGN_12795: yihG - putative acyltransferase YihG, at 1,309,108 to 1,310,040
yihG
Position (kb)
1308
1309 Strain fitness (log2 ratio)
-2
-1
0
1 at 1308.915 kb on - strand, within HEPCGN_12790 at 1309.095 kb on + strand at 1309.096 kb on - strand at 1309.107 kb on + strand at 1309.247 kb on + strand, within yihG at 1309.248 kb on - strand, within yihG at 1309.293 kb on + strand, within yihG at 1309.300 kb on + strand, within yihG at 1309.300 kb on + strand, within yihG at 1309.301 kb on - strand, within yihG at 1309.326 kb on - strand, within yihG at 1309.329 kb on - strand, within yihG at 1309.380 kb on - strand, within yihG at 1309.384 kb on - strand, within yihG at 1309.397 kb on - strand, within yihG at 1309.404 kb on + strand, within yihG at 1309.404 kb on + strand, within yihG at 1309.411 kb on - strand, within yihG at 1309.411 kb on - strand, within yihG at 1309.419 kb on + strand, within yihG at 1309.420 kb on - strand, within yihG at 1309.431 kb on + strand, within yihG at 1309.431 kb on + strand, within yihG at 1309.432 kb on - strand, within yihG at 1309.432 kb on - strand, within yihG at 1309.477 kb on - strand, within yihG at 1309.562 kb on - strand, within yihG at 1309.574 kb on - strand, within yihG at 1309.578 kb on - strand, within yihG at 1309.578 kb on - strand, within yihG at 1309.578 kb on - strand, within yihG at 1309.580 kb on + strand, within yihG at 1309.580 kb on + strand, within yihG at 1309.769 kb on + strand, within yihG at 1309.770 kb on - strand, within yihG at 1309.770 kb on - strand, within yihG at 1309.776 kb on - strand, within yihG at 1309.831 kb on - strand, within yihG at 1309.856 kb on + strand, within yihG at 1309.857 kb on - strand, within yihG at 1309.883 kb on + strand, within yihG at 1309.896 kb on - strand, within yihG at 1309.902 kb on + strand, within yihG at 1309.916 kb on + strand, within yihG at 1309.917 kb on - strand, within yihG at 1309.917 kb on - strand, within yihG at 1309.917 kb on - strand, within yihG at 1309.927 kb on + strand, within yihG
Per-strain Table
Position Strand Gene LocusTag Fraction Bas61 remove 1,308,915 - HEPCGN_12790 0.70 -0.9 1,309,095 + -0.4 1,309,096 - +0.0 1,309,107 + +1.2 1,309,247 + yihG HEPCGN_12795 0.15 +0.1 1,309,248 - yihG HEPCGN_12795 0.15 -0.2 1,309,293 + yihG HEPCGN_12795 0.20 +0.8 1,309,300 + yihG HEPCGN_12795 0.21 +0.1 1,309,300 + yihG HEPCGN_12795 0.21 -0.4 1,309,301 - yihG HEPCGN_12795 0.21 +0.4 1,309,326 - yihG HEPCGN_12795 0.23 +0.5 1,309,329 - yihG HEPCGN_12795 0.24 -2.4 1,309,380 - yihG HEPCGN_12795 0.29 +0.6 1,309,384 - yihG HEPCGN_12795 0.30 +0.4 1,309,397 - yihG HEPCGN_12795 0.31 -0.7 1,309,404 + yihG HEPCGN_12795 0.32 +0.3 1,309,404 + yihG HEPCGN_12795 0.32 +0.8 1,309,411 - yihG HEPCGN_12795 0.32 +0.2 1,309,411 - yihG HEPCGN_12795 0.32 +0.1 1,309,419 + yihG HEPCGN_12795 0.33 +0.1 1,309,420 - yihG HEPCGN_12795 0.33 -0.7 1,309,431 + yihG HEPCGN_12795 0.35 -0.5 1,309,431 + yihG HEPCGN_12795 0.35 -2.7 1,309,432 - yihG HEPCGN_12795 0.35 -0.3 1,309,432 - yihG HEPCGN_12795 0.35 -1.1 1,309,477 - yihG HEPCGN_12795 0.40 -1.2 1,309,562 - yihG HEPCGN_12795 0.49 +0.4 1,309,574 - yihG HEPCGN_12795 0.50 -1.2 1,309,578 - yihG HEPCGN_12795 0.50 -2.3 1,309,578 - yihG HEPCGN_12795 0.50 +0.2 1,309,578 - yihG HEPCGN_12795 0.50 -1.0 1,309,580 + yihG HEPCGN_12795 0.51 +0.6 1,309,580 + yihG HEPCGN_12795 0.51 -0.2 1,309,769 + yihG HEPCGN_12795 0.71 -0.1 1,309,770 - yihG HEPCGN_12795 0.71 +0.7 1,309,770 - yihG HEPCGN_12795 0.71 +0.3 1,309,776 - yihG HEPCGN_12795 0.72 +0.9 1,309,831 - yihG HEPCGN_12795 0.77 -0.6 1,309,856 + yihG HEPCGN_12795 0.80 -0.1 1,309,857 - yihG HEPCGN_12795 0.80 -0.3 1,309,883 + yihG HEPCGN_12795 0.83 +1.7 1,309,896 - yihG HEPCGN_12795 0.84 -0.2 1,309,902 + yihG HEPCGN_12795 0.85 -0.5 1,309,916 + yihG HEPCGN_12795 0.87 +0.1 1,309,917 - yihG HEPCGN_12795 0.87 -1.3 1,309,917 - yihG HEPCGN_12795 0.87 -0.5 1,309,917 - yihG HEPCGN_12795 0.87 -0.2 1,309,927 + yihG HEPCGN_12795 0.88 -0.7
Or see this region's nucleotide sequence