Strain Fitness in Escherichia coli ECOR38 around HEPCGN_05560

Experiment: Bas61

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas61
984,757	+	ydiR	HEPCGN_05550	0.86	-0.3
984,758	-	ydiR	HEPCGN_05550	0.86	-0.2
984,786	-	ydiR	HEPCGN_05550	0.89	-0.6
984,795	+	ydiR	HEPCGN_05550	0.90	+0.5
984,795	+	ydiR	HEPCGN_05550	0.90	-0.4
984,879	-				+0.5
984,904	-				-0.5
984,986	+				+0.9
984,987	-				-0.8
985,128	+	ydiQ	HEPCGN_05555	0.28	+0.1
985,134	-	ydiQ	HEPCGN_05555	0.29	-0.6
985,220	+	ydiQ	HEPCGN_05555	0.40	-1.4
985,254	-	ydiQ	HEPCGN_05555	0.44	-0.8
985,607	+	ydiQ	HEPCGN_05555	0.89	+0.5
985,609	+	ydiQ	HEPCGN_05555	0.89	+0.7
985,848	+		HEPCGN_05560	0.78	-2.0
985,849	-		HEPCGN_05560	0.79	-0.6
985,928	-				+1.0
985,950	+				+0.9
985,950	+				-0.1
985,993	-				-2.1
986,453	+	araC	HEPCGN_05565	0.51	-0.2
986,670	+	araC	HEPCGN_05565	0.75	+1.1
986,863	+				-0.2