Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS20930

Experiment: R2A motility; outer cut

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS20925 and ABZR88_RS20930 are separated by 490 nucleotidesABZR88_RS20930 and ABZR88_RS20935 are separated by 196 nucleotides ABZR88_RS20925: ABZR88_RS20925 - thiamine-phosphate kinase, at 5,059,077 to 5,060,120 _RS20925 ABZR88_RS20930: ABZR88_RS20930 - methionine synthase, at 5,060,611 to 5,064,300 _RS20930 ABZR88_RS20935: ABZR88_RS20935 - methylenetetrahydrofolate reductase [NAD(P)H], at 5,064,497 to 5,065,456 _RS20935 Position (kb) 5060 5061 5062 5063 5064 5065Strain fitness (log2 ratio) -2 -1 0 1at 5060.119 kb on - strandat 5060.213 kb on + strandat 5060.324 kb on + strandat 5060.345 kb on + strandat 5060.377 kb on - strandat 5060.478 kb on - strandat 5060.478 kb on - strandat 5060.752 kb on - strandat 5060.796 kb on - strandat 5060.799 kb on + strandat 5060.799 kb on + strandat 5061.191 kb on - strand, within ABZR88_RS20930at 5061.399 kb on + strand, within ABZR88_RS20930at 5061.464 kb on - strand, within ABZR88_RS20930at 5062.127 kb on - strand, within ABZR88_RS20930at 5062.131 kb on + strand, within ABZR88_RS20930at 5062.134 kb on - strand, within ABZR88_RS20930at 5062.326 kb on + strand, within ABZR88_RS20930at 5062.758 kb on - strand, within ABZR88_RS20930at 5062.916 kb on + strand, within ABZR88_RS20930at 5062.965 kb on - strand, within ABZR88_RS20930at 5063.956 kb on + strandat 5064.135 kb on + strandat 5064.136 kb on - strandat 5064.295 kb on + strandat 5064.296 kb on - strandat 5064.456 kb on - strandat 5064.457 kb on + strandat 5064.590 kb on - strandat 5064.663 kb on - strand, within ABZR88_RS20935at 5064.728 kb on - strand, within ABZR88_RS20935at 5064.759 kb on - strand, within ABZR88_RS20935at 5065.003 kb on + strand, within ABZR88_RS20935at 5065.003 kb on + strand, within ABZR88_RS20935

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A motility; outer cut
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5,060,119 - +0.1
5,060,213 + -1.0
5,060,324 + -0.4
5,060,345 + +0.4
5,060,377 - -0.4
5,060,478 - -1.4
5,060,478 - -0.6
5,060,752 - -0.3
5,060,796 - -1.0
5,060,799 + -1.7
5,060,799 + -2.5
5,061,191 - ABZR88_RS20930 0.16 +0.4
5,061,399 + ABZR88_RS20930 0.21 +0.4
5,061,464 - ABZR88_RS20930 0.23 -0.9
5,062,127 - ABZR88_RS20930 0.41 -1.6
5,062,131 + ABZR88_RS20930 0.41 -2.5
5,062,134 - ABZR88_RS20930 0.41 +0.8
5,062,326 + ABZR88_RS20930 0.46 -0.2
5,062,758 - ABZR88_RS20930 0.58 -2.2
5,062,916 + ABZR88_RS20930 0.62 -0.6
5,062,965 - ABZR88_RS20930 0.64 -0.4
5,063,956 + -2.0
5,064,135 + +0.0
5,064,136 - -1.9
5,064,295 + -1.2
5,064,296 - -0.9
5,064,456 - +0.3
5,064,457 + -0.6
5,064,590 - +0.1
5,064,663 - ABZR88_RS20935 0.17 +0.6
5,064,728 - ABZR88_RS20935 0.24 +1.0
5,064,759 - ABZR88_RS20935 0.27 +0.4
5,065,003 + ABZR88_RS20935 0.53 +0.7
5,065,003 + ABZR88_RS20935 0.53 +0.8

Or see this region's nucleotide sequence