Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS20355

Experiment: R2A motility; outer cut

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS20350 and ABZR88_RS20355 are separated by 129 nucleotidesABZR88_RS20355 and ABZR88_RS20360 are separated by 98 nucleotidesABZR88_RS20360 and ABZR88_RS20365 are separated by 319 nucleotides ABZR88_RS20350: ABZR88_RS20350 - ligase-associated DNA damage response exonuclease, at 4,933,691 to 4,934,713 _RS20350 ABZR88_RS20355: ABZR88_RS20355 - DUF2752 domain-containing protein, at 4,934,843 to 4,935,181 _RS20355 ABZR88_RS20360: ABZR88_RS20360 - TM2 domain-containing protein, at 4,935,280 to 4,935,651 _RS20360 ABZR88_RS20365: ABZR88_RS20365 - isochorismatase family protein, at 4,935,971 to 4,936,540 _RS20365 Position (kb) 4934 4935 4936Strain fitness (log2 ratio) -2 -1 0 1 2at 4934.020 kb on + strand, within ABZR88_RS20350at 4934.131 kb on + strand, within ABZR88_RS20350at 4934.171 kb on - strand, within ABZR88_RS20350at 4934.267 kb on + strand, within ABZR88_RS20350at 4934.333 kb on + strand, within ABZR88_RS20350at 4934.421 kb on - strand, within ABZR88_RS20350at 4934.536 kb on - strand, within ABZR88_RS20350at 4934.569 kb on - strand, within ABZR88_RS20350at 4934.622 kb on + strandat 4934.623 kb on - strandat 4934.857 kb on - strandat 4934.998 kb on + strand, within ABZR88_RS20355at 4935.201 kb on - strandat 4935.277 kb on - strandat 4935.301 kb on + strandat 4935.302 kb on - strandat 4935.400 kb on + strand, within ABZR88_RS20360at 4935.400 kb on + strand, within ABZR88_RS20360at 4935.618 kb on + strandat 4935.672 kb on + strandat 4935.691 kb on + strandat 4935.692 kb on - strandat 4935.900 kb on + strandat 4935.901 kb on - strandat 4936.045 kb on + strand, within ABZR88_RS20365at 4936.102 kb on + strand, within ABZR88_RS20365at 4936.146 kb on - strand, within ABZR88_RS20365

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A motility; outer cut
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4,934,020 + ABZR88_RS20350 0.32 +0.1
4,934,131 + ABZR88_RS20350 0.43 -0.1
4,934,171 - ABZR88_RS20350 0.47 +0.4
4,934,267 + ABZR88_RS20350 0.56 -0.7
4,934,333 + ABZR88_RS20350 0.63 -0.3
4,934,421 - ABZR88_RS20350 0.71 -1.8
4,934,536 - ABZR88_RS20350 0.83 +0.6
4,934,569 - ABZR88_RS20350 0.86 +1.8
4,934,622 + -1.3
4,934,623 - +0.8
4,934,857 - +0.5
4,934,998 + ABZR88_RS20355 0.46 -2.6
4,935,201 - -0.0
4,935,277 - -0.5
4,935,301 + +0.3
4,935,302 - -0.4
4,935,400 + ABZR88_RS20360 0.32 -0.7
4,935,400 + ABZR88_RS20360 0.32 +0.0
4,935,618 + +0.1
4,935,672 + +0.3
4,935,691 + -0.1
4,935,692 - -0.3
4,935,900 + -0.5
4,935,901 - +0.1
4,936,045 + ABZR88_RS20365 0.13 -0.8
4,936,102 + ABZR88_RS20365 0.23 -0.1
4,936,146 - ABZR88_RS20365 0.31 -0.9

Or see this region's nucleotide sequence