Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS20090

Experiment: R2A motility; outer cut

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS20085 and ABZR88_RS20090 overlap by 17 nucleotidesABZR88_RS20090 and ABZR88_RS20095 are separated by 142 nucleotides ABZR88_RS20085: ABZR88_RS20085 - glycosyltransferase, at 4,877,260 to 4,878,390 _RS20085 ABZR88_RS20090: ABZR88_RS20090 - lysylphosphatidylglycerol synthase domain-containing protein, at 4,878,374 to 4,879,345 _RS20090 ABZR88_RS20095: ABZR88_RS20095 - dienelactone hydrolase family protein, at 4,879,488 to 4,880,342 _RS20095 Position (kb) 4878 4879 4880Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4877.515 kb on + strand, within ABZR88_RS20085at 4877.542 kb on + strand, within ABZR88_RS20085at 4877.629 kb on - strand, within ABZR88_RS20085at 4877.630 kb on + strand, within ABZR88_RS20085at 4877.921 kb on + strand, within ABZR88_RS20085at 4877.939 kb on + strand, within ABZR88_RS20085at 4878.051 kb on + strand, within ABZR88_RS20085at 4878.276 kb on + strand, within ABZR88_RS20085at 4878.331 kb on + strandat 4878.370 kb on + strandat 4878.377 kb on + strandat 4878.456 kb on - strandat 4878.587 kb on + strand, within ABZR88_RS20090at 4878.644 kb on - strand, within ABZR88_RS20090at 4878.800 kb on - strand, within ABZR88_RS20090at 4878.864 kb on + strand, within ABZR88_RS20090at 4878.864 kb on + strand, within ABZR88_RS20090at 4878.977 kb on - strand, within ABZR88_RS20090at 4879.166 kb on + strand, within ABZR88_RS20090at 4879.312 kb on + strandat 4879.315 kb on - strandat 4879.393 kb on + strandat 4879.521 kb on - strandat 4879.529 kb on - strandat 4879.556 kb on - strandat 4879.634 kb on + strand, within ABZR88_RS20095at 4879.757 kb on - strand, within ABZR88_RS20095at 4879.951 kb on - strand, within ABZR88_RS20095at 4879.963 kb on + strand, within ABZR88_RS20095at 4880.059 kb on - strand, within ABZR88_RS20095at 4880.097 kb on - strand, within ABZR88_RS20095at 4880.145 kb on - strand, within ABZR88_RS20095at 4880.328 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A motility; outer cut
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4,877,515 + ABZR88_RS20085 0.23 +0.1
4,877,542 + ABZR88_RS20085 0.25 -0.3
4,877,629 - ABZR88_RS20085 0.33 -0.2
4,877,630 + ABZR88_RS20085 0.33 -0.6
4,877,921 + ABZR88_RS20085 0.58 -0.6
4,877,939 + ABZR88_RS20085 0.60 -0.3
4,878,051 + ABZR88_RS20085 0.70 +2.9
4,878,276 + ABZR88_RS20085 0.90 -0.2
4,878,331 + -0.9
4,878,370 + -0.7
4,878,377 + -0.6
4,878,456 - +1.6
4,878,587 + ABZR88_RS20090 0.22 +0.6
4,878,644 - ABZR88_RS20090 0.28 -1.6
4,878,800 - ABZR88_RS20090 0.44 -0.8
4,878,864 + ABZR88_RS20090 0.50 -1.8
4,878,864 + ABZR88_RS20090 0.50 -0.1
4,878,977 - ABZR88_RS20090 0.62 -1.8
4,879,166 + ABZR88_RS20090 0.81 +0.4
4,879,312 + -1.1
4,879,315 - -0.7
4,879,393 + +0.4
4,879,521 - +0.5
4,879,529 - +0.4
4,879,556 - -0.1
4,879,634 + ABZR88_RS20095 0.17 -0.5
4,879,757 - ABZR88_RS20095 0.31 +0.1
4,879,951 - ABZR88_RS20095 0.54 +0.7
4,879,963 + ABZR88_RS20095 0.56 +0.2
4,880,059 - ABZR88_RS20095 0.67 +1.7
4,880,097 - ABZR88_RS20095 0.71 -0.4
4,880,145 - ABZR88_RS20095 0.77 -1.4
4,880,328 - +0.4

Or see this region's nucleotide sequence