Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS19865

Experiment: R2A motility; outer cut

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS19860 and ABZR88_RS19865 are separated by 4 nucleotidesABZR88_RS19865 and ABZR88_RS19870 are separated by 69 nucleotidesABZR88_RS19870 and ABZR88_RS19875 are separated by 202 nucleotides ABZR88_RS19860: ABZR88_RS19860 - ABC transporter permease, at 4,824,688 to 4,825,746 _RS19860 ABZR88_RS19865: ABZR88_RS19865 - BT_3928 family protein, at 4,825,751 to 4,826,914 _RS19865 ABZR88_RS19870: ABZR88_RS19870 - DUF1599 domain-containing protein, at 4,826,984 to 4,827,466 _RS19870 ABZR88_RS19875: ABZR88_RS19875 - dihydropteroate synthase, at 4,827,669 to 4,828,532 _RS19875 Position (kb) 4825 4826 4827Strain fitness (log2 ratio) -1 0 1 2at 4825.120 kb on - strand, within ABZR88_RS19860at 4825.131 kb on - strand, within ABZR88_RS19860at 4825.204 kb on - strand, within ABZR88_RS19860at 4825.341 kb on + strand, within ABZR88_RS19860at 4825.359 kb on + strand, within ABZR88_RS19860at 4825.387 kb on - strand, within ABZR88_RS19860at 4825.390 kb on + strand, within ABZR88_RS19860at 4825.479 kb on - strand, within ABZR88_RS19860at 4825.519 kb on - strand, within ABZR88_RS19860at 4825.522 kb on + strand, within ABZR88_RS19860at 4825.544 kb on + strand, within ABZR88_RS19860at 4825.544 kb on + strand, within ABZR88_RS19860at 4825.803 kb on + strandat 4825.863 kb on - strandat 4826.209 kb on + strand, within ABZR88_RS19865at 4826.350 kb on + strand, within ABZR88_RS19865at 4826.405 kb on - strand, within ABZR88_RS19865at 4826.623 kb on + strand, within ABZR88_RS19865at 4826.803 kb on - strandat 4826.876 kb on + strandat 4826.930 kb on + strandat 4826.931 kb on - strandat 4826.933 kb on + strandat 4827.627 kb on + strandat 4827.627 kb on + strandat 4827.629 kb on + strandat 4827.657 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A motility; outer cut
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4,825,120 - ABZR88_RS19860 0.41 -0.9
4,825,131 - ABZR88_RS19860 0.42 +1.3
4,825,204 - ABZR88_RS19860 0.49 -0.1
4,825,341 + ABZR88_RS19860 0.62 -0.4
4,825,359 + ABZR88_RS19860 0.63 +0.3
4,825,387 - ABZR88_RS19860 0.66 -0.6
4,825,390 + ABZR88_RS19860 0.66 -0.3
4,825,479 - ABZR88_RS19860 0.75 -0.8
4,825,519 - ABZR88_RS19860 0.78 +0.3
4,825,522 + ABZR88_RS19860 0.79 +0.1
4,825,544 + ABZR88_RS19860 0.81 -0.9
4,825,544 + ABZR88_RS19860 0.81 +1.8
4,825,803 + +1.4
4,825,863 - -1.2
4,826,209 + ABZR88_RS19865 0.39 +0.4
4,826,350 + ABZR88_RS19865 0.51 +1.4
4,826,405 - ABZR88_RS19865 0.56 -0.9
4,826,623 + ABZR88_RS19865 0.75 -1.6
4,826,803 - +1.4
4,826,876 + -0.2
4,826,930 + +0.2
4,826,931 - +2.4
4,826,933 + -0.4
4,827,627 + +1.4
4,827,627 + -1.4
4,827,629 + +0.5
4,827,657 - +1.1

Or see this region's nucleotide sequence