Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS17450

Experiment: R2A motility; outer cut

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS17445 and ABZR88_RS17450 are separated by 124 nucleotidesABZR88_RS17450 and ABZR88_RS17455 are separated by 116 nucleotidesABZR88_RS17455 and ABZR88_RS17460 are separated by 66 nucleotides ABZR88_RS17445: ABZR88_RS17445 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 4,269,536 to 4,270,354 _RS17445 ABZR88_RS17450: ABZR88_RS17450 - glycosyltransferase family 1 protein, at 4,270,479 to 4,271,582 _RS17450 ABZR88_RS17455: ABZR88_RS17455 - L-threonylcarbamoyladenylate synthase, at 4,271,699 to 4,272,265 _RS17455 ABZR88_RS17460: ABZR88_RS17460 - CCA tRNA nucleotidyltransferase, at 4,272,332 to 4,273,744 _RS17460 Position (kb) 4270 4271 4272Strain fitness (log2 ratio) -3 -2 -1 0 1at 4270.537 kb on - strandat 4270.740 kb on + strand, within ABZR88_RS17450at 4270.791 kb on - strand, within ABZR88_RS17450at 4270.818 kb on - strand, within ABZR88_RS17450at 4270.866 kb on + strand, within ABZR88_RS17450at 4270.867 kb on - strand, within ABZR88_RS17450at 4270.871 kb on + strand, within ABZR88_RS17450at 4270.872 kb on - strand, within ABZR88_RS17450at 4271.044 kb on + strand, within ABZR88_RS17450at 4271.073 kb on + strand, within ABZR88_RS17450at 4271.281 kb on - strand, within ABZR88_RS17450at 4271.625 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A motility; outer cut
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4,270,537 - -3.5
4,270,740 + ABZR88_RS17450 0.24 +0.7
4,270,791 - ABZR88_RS17450 0.28 -0.8
4,270,818 - ABZR88_RS17450 0.31 -0.8
4,270,866 + ABZR88_RS17450 0.35 -0.8
4,270,867 - ABZR88_RS17450 0.35 -2.5
4,270,871 + ABZR88_RS17450 0.36 -2.2
4,270,872 - ABZR88_RS17450 0.36 -1.9
4,271,044 + ABZR88_RS17450 0.51 -1.8
4,271,073 + ABZR88_RS17450 0.54 -2.9
4,271,281 - ABZR88_RS17450 0.73 -2.7
4,271,625 + +1.1

Or see this region's nucleotide sequence