Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS15240

Experiment: R2A motility; outer cut

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS15235 and ABZR88_RS15240 are separated by 294 nucleotidesABZR88_RS15240 and ABZR88_RS15245 are separated by 241 nucleotides ABZR88_RS15235: ABZR88_RS15235 - glycerol kinase GlpK, at 3,773,205 to 3,774,695 _RS15235 ABZR88_RS15240: ABZR88_RS15240 - hypothetical protein, at 3,774,990 to 3,775,418 _RS15240 ABZR88_RS15245: ABZR88_RS15245 - ABC transporter substrate-binding protein, at 3,775,660 to 3,776,820 _RS15245 Position (kb) 3774 3775 3776Strain fitness (log2 ratio) -1 0 1at 3774.335 kb on + strand, within ABZR88_RS15235at 3774.382 kb on + strand, within ABZR88_RS15235at 3774.524 kb on - strand, within ABZR88_RS15235at 3774.734 kb on - strandat 3774.899 kb on + strandat 3774.932 kb on - strandat 3774.971 kb on + strandat 3774.971 kb on + strandat 3774.978 kb on + strandat 3775.014 kb on - strandat 3775.020 kb on - strandat 3775.089 kb on - strand, within ABZR88_RS15240at 3775.519 kb on - strandat 3775.581 kb on - strandat 3775.583 kb on - strandat 3775.634 kb on + strandat 3775.834 kb on + strand, within ABZR88_RS15245at 3775.909 kb on + strand, within ABZR88_RS15245at 3776.045 kb on + strand, within ABZR88_RS15245at 3776.091 kb on - strand, within ABZR88_RS15245at 3776.158 kb on + strand, within ABZR88_RS15245at 3776.222 kb on + strand, within ABZR88_RS15245

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A motility; outer cut
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3,774,335 + ABZR88_RS15235 0.76 -0.3
3,774,382 + ABZR88_RS15235 0.79 -0.6
3,774,524 - ABZR88_RS15235 0.88 -0.0
3,774,734 - +1.3
3,774,899 + +0.1
3,774,932 - -0.4
3,774,971 + -0.2
3,774,971 + -0.2
3,774,978 + -1.1
3,775,014 - -1.6
3,775,020 - -0.5
3,775,089 - ABZR88_RS15240 0.23 -0.8
3,775,519 - +0.1
3,775,581 - -0.3
3,775,583 - -0.3
3,775,634 + +0.3
3,775,834 + ABZR88_RS15245 0.15 +0.3
3,775,909 + ABZR88_RS15245 0.21 -0.7
3,776,045 + ABZR88_RS15245 0.33 +0.1
3,776,091 - ABZR88_RS15245 0.37 +0.2
3,776,158 + ABZR88_RS15245 0.43 -0.7
3,776,222 + ABZR88_RS15245 0.48 -0.4

Or see this region's nucleotide sequence