Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS14985

Experiment: R2A motility; outer cut

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS14980 and ABZR88_RS14985 are separated by 5 nucleotidesABZR88_RS14985 and ABZR88_RS14990 are separated by 38 nucleotides ABZR88_RS14980: ABZR88_RS14980 - efflux RND transporter permease subunit, at 3,714,036 to 3,717,167 _RS14980 ABZR88_RS14985: ABZR88_RS14985 - efflux RND transporter periplasmic adaptor subunit, at 3,717,173 to 3,718,246 _RS14985 ABZR88_RS14990: ABZR88_RS14990 - TolC family protein, at 3,718,285 to 3,719,532 _RS14990 Position (kb) 3717 3718 3719Strain fitness (log2 ratio) -3 -2 -1 0 1at 3716.197 kb on + strand, within ABZR88_RS14980at 3717.026 kb on + strandat 3717.026 kb on + strandat 3717.034 kb on - strandat 3717.074 kb on + strandat 3717.074 kb on + strandat 3717.299 kb on + strand, within ABZR88_RS14985at 3717.363 kb on - strand, within ABZR88_RS14985at 3717.363 kb on - strand, within ABZR88_RS14985at 3717.496 kb on + strand, within ABZR88_RS14985at 3717.497 kb on - strand, within ABZR88_RS14985at 3717.527 kb on + strand, within ABZR88_RS14985at 3717.550 kb on + strand, within ABZR88_RS14985at 3717.554 kb on - strand, within ABZR88_RS14985at 3717.768 kb on - strand, within ABZR88_RS14985at 3717.817 kb on + strand, within ABZR88_RS14985at 3717.856 kb on + strand, within ABZR88_RS14985at 3717.856 kb on + strand, within ABZR88_RS14985at 3717.957 kb on - strand, within ABZR88_RS14985at 3718.239 kb on + strandat 3718.265 kb on - strandat 3718.287 kb on - strandat 3718.479 kb on + strand, within ABZR88_RS14990at 3718.603 kb on + strand, within ABZR88_RS14990at 3718.677 kb on - strand, within ABZR88_RS14990at 3718.689 kb on - strand, within ABZR88_RS14990at 3718.701 kb on + strand, within ABZR88_RS14990at 3718.816 kb on - strand, within ABZR88_RS14990at 3718.902 kb on - strand, within ABZR88_RS14990at 3718.922 kb on - strand, within ABZR88_RS14990at 3718.927 kb on + strand, within ABZR88_RS14990at 3718.994 kb on + strand, within ABZR88_RS14990at 3718.995 kb on - strand, within ABZR88_RS14990at 3719.048 kb on + strand, within ABZR88_RS14990at 3719.068 kb on - strand, within ABZR88_RS14990at 3719.102 kb on + strand, within ABZR88_RS14990at 3719.149 kb on - strand, within ABZR88_RS14990

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A motility; outer cut
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3,716,197 + ABZR88_RS14980 0.69 -2.3
3,717,026 + -2.3
3,717,026 + -1.8
3,717,034 - -2.1
3,717,074 + -2.1
3,717,074 + -1.4
3,717,299 + ABZR88_RS14985 0.12 -2.1
3,717,363 - ABZR88_RS14985 0.18 -1.7
3,717,363 - ABZR88_RS14985 0.18 -1.5
3,717,496 + ABZR88_RS14985 0.30 -1.8
3,717,497 - ABZR88_RS14985 0.30 -1.8
3,717,527 + ABZR88_RS14985 0.33 -2.6
3,717,550 + ABZR88_RS14985 0.35 -2.0
3,717,554 - ABZR88_RS14985 0.35 -3.1
3,717,768 - ABZR88_RS14985 0.55 -0.7
3,717,817 + ABZR88_RS14985 0.60 -2.1
3,717,856 + ABZR88_RS14985 0.64 -0.8
3,717,856 + ABZR88_RS14985 0.64 -1.1
3,717,957 - ABZR88_RS14985 0.73 -2.0
3,718,239 + -2.0
3,718,265 - -1.7
3,718,287 - +0.1
3,718,479 + ABZR88_RS14990 0.16 -2.0
3,718,603 + ABZR88_RS14990 0.25 -2.2
3,718,677 - ABZR88_RS14990 0.31 -1.3
3,718,689 - ABZR88_RS14990 0.32 -1.9
3,718,701 + ABZR88_RS14990 0.33 +0.2
3,718,816 - ABZR88_RS14990 0.43 -1.6
3,718,902 - ABZR88_RS14990 0.49 -1.1
3,718,922 - ABZR88_RS14990 0.51 -1.7
3,718,927 + ABZR88_RS14990 0.51 -2.3
3,718,994 + ABZR88_RS14990 0.57 -1.9
3,718,995 - ABZR88_RS14990 0.57 -1.8
3,719,048 + ABZR88_RS14990 0.61 -2.8
3,719,068 - ABZR88_RS14990 0.63 -1.7
3,719,102 + ABZR88_RS14990 0.65 -1.3
3,719,149 - ABZR88_RS14990 0.69 -1.6

Or see this region's nucleotide sequence