Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS11760

Experiment: R2A motility; outer cut

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS11755 and ABZR88_RS11760 are separated by 426 nucleotidesABZR88_RS11760 and ABZR88_RS11765 are separated by 178 nucleotidesABZR88_RS11765 and ABZR88_RS11770 are separated by 165 nucleotidesABZR88_RS11770 and ABZR88_RS11775 are separated by 117 nucleotides ABZR88_RS11755: ABZR88_RS11755 - aspartate kinase, at 2,892,254 to 2,893,510 _RS11755 ABZR88_RS11760: ABZR88_RS11760 - phosphatidylinositol-specific phospholipase C/glycerophosphodiester phosphodiesterase family protein, at 2,893,937 to 2,894,770 _RS11760 ABZR88_RS11765: ABZR88_RS11765 - hypothetical protein, at 2,894,949 to 2,895,077 _RS11765 ABZR88_RS11770: ABZR88_RS11770 - tRNA-Arg, at 2,895,243 to 2,895,314 _RS11770 ABZR88_RS11775: ABZR88_RS11775 - acyl-CoA desaturase, at 2,895,432 to 2,896,160 _RS11775 Position (kb) 2893 2894 2895Strain fitness (log2 ratio) -2 -1 0 1at 2893.014 kb on - strand, within ABZR88_RS11755at 2893.280 kb on - strand, within ABZR88_RS11755at 2893.351 kb on - strand, within ABZR88_RS11755at 2893.360 kb on - strand, within ABZR88_RS11755at 2893.484 kb on - strandat 2893.508 kb on + strandat 2893.508 kb on + strandat 2893.540 kb on + strandat 2893.660 kb on + strandat 2893.660 kb on + strandat 2894.216 kb on - strand, within ABZR88_RS11760at 2894.481 kb on + strand, within ABZR88_RS11760at 2894.482 kb on - strand, within ABZR88_RS11760at 2894.684 kb on - strand, within ABZR88_RS11760at 2894.787 kb on + strandat 2894.802 kb on - strandat 2894.807 kb on - strandat 2894.893 kb on - strandat 2894.917 kb on + strandat 2895.113 kb on + strandat 2895.194 kb on + strandat 2895.419 kb on - strandat 2895.505 kb on - strand, within ABZR88_RS11775

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A motility; outer cut
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2,893,014 - ABZR88_RS11755 0.60 +1.4
2,893,280 - ABZR88_RS11755 0.82 -0.0
2,893,351 - ABZR88_RS11755 0.87 -1.1
2,893,360 - ABZR88_RS11755 0.88 +0.1
2,893,484 - -0.4
2,893,508 + +0.3
2,893,508 + +0.6
2,893,540 + +1.1
2,893,660 + -0.2
2,893,660 + +1.7
2,894,216 - ABZR88_RS11760 0.33 -2.1
2,894,481 + ABZR88_RS11760 0.65 -0.6
2,894,482 - ABZR88_RS11760 0.65 -1.7
2,894,684 - ABZR88_RS11760 0.90 -0.6
2,894,787 + -0.2
2,894,802 - -1.6
2,894,807 - -0.2
2,894,893 - -0.8
2,894,917 + -0.6
2,895,113 + +0.0
2,895,194 + +0.3
2,895,419 - -0.1
2,895,505 - ABZR88_RS11775 0.10 -0.4

Or see this region's nucleotide sequence