Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS06605

Experiment: R2A motility; outer cut

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS06600 and ABZR88_RS06605 are separated by 142 nucleotidesABZR88_RS06605 and ABZR88_RS06610 are separated by 172 nucleotides ABZR88_RS06600: ABZR88_RS06600 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC, at 1,624,034 to 1,625,233 _RS06600 ABZR88_RS06605: ABZR88_RS06605 - hypothetical protein, at 1,625,376 to 1,626,440 _RS06605 ABZR88_RS06610: ABZR88_RS06610 - class I SAM-dependent methyltransferase, at 1,626,613 to 1,627,497 _RS06610 Position (kb) 1625 1626 1627Strain fitness (log2 ratio) -2 -1 0 1at 1625.705 kb on - strand, within ABZR88_RS06605at 1625.879 kb on + strand, within ABZR88_RS06605at 1626.113 kb on - strand, within ABZR88_RS06605at 1626.447 kb on - strandat 1626.450 kb on - strandat 1626.483 kb on - strandat 1626.567 kb on + strandat 1626.568 kb on - strandat 1626.806 kb on - strand, within ABZR88_RS06610at 1626.927 kb on + strand, within ABZR88_RS06610at 1627.047 kb on + strand, within ABZR88_RS06610at 1627.156 kb on - strand, within ABZR88_RS06610

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A motility; outer cut
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1,625,705 - ABZR88_RS06605 0.31 -0.2
1,625,879 + ABZR88_RS06605 0.47 -0.4
1,626,113 - ABZR88_RS06605 0.69 -0.8
1,626,447 - -0.2
1,626,450 - -0.1
1,626,483 - +0.1
1,626,567 + +0.1
1,626,568 - +0.2
1,626,806 - ABZR88_RS06610 0.22 -1.6
1,626,927 + ABZR88_RS06610 0.35 -0.8
1,627,047 + ABZR88_RS06610 0.49 +0.2
1,627,156 - ABZR88_RS06610 0.61 -1.8

Or see this region's nucleotide sequence