Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS04115

Experiment: R2A motility; outer cut

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS04110 and ABZR88_RS04115 overlap by 1 nucleotidesABZR88_RS04115 and ABZR88_RS04120 are separated by 127 nucleotides ABZR88_RS04110: ABZR88_RS04110 - molybdopterin cofactor-binding domain-containing protein, at 980,005 to 982,146 _RS04110 ABZR88_RS04115: ABZR88_RS04115 - (2Fe-2S)-binding protein, at 982,146 to 982,610 _RS04115 ABZR88_RS04120: ABZR88_RS04120 - DUF4271 domain-containing protein, at 982,738 to 983,736 _RS04120 Position (kb) 982 983Strain fitness (log2 ratio) -2 -1 0 1at 981.643 kb on - strand, within ABZR88_RS04110at 981.923 kb on - strand, within ABZR88_RS04110at 982.410 kb on + strand, within ABZR88_RS04115at 982.422 kb on - strand, within ABZR88_RS04115at 982.462 kb on - strand, within ABZR88_RS04115at 982.462 kb on - strand, within ABZR88_RS04115at 982.466 kb on + strand, within ABZR88_RS04115at 982.659 kb on + strandat 982.782 kb on - strandat 982.782 kb on - strandat 983.129 kb on + strand, within ABZR88_RS04120at 983.149 kb on - strand, within ABZR88_RS04120at 983.149 kb on - strand, within ABZR88_RS04120at 983.308 kb on - strand, within ABZR88_RS04120at 983.311 kb on + strand, within ABZR88_RS04120at 983.577 kb on - strand, within ABZR88_RS04120

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A motility; outer cut
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981,643 - ABZR88_RS04110 0.76 +1.2
981,923 - ABZR88_RS04110 0.90 -0.7
982,410 + ABZR88_RS04115 0.57 -1.1
982,422 - ABZR88_RS04115 0.59 -0.6
982,462 - ABZR88_RS04115 0.68 -0.6
982,462 - ABZR88_RS04115 0.68 -1.6
982,466 + ABZR88_RS04115 0.69 -0.6
982,659 + -2.7
982,782 - +0.3
982,782 - -2.0
983,129 + ABZR88_RS04120 0.39 -1.7
983,149 - ABZR88_RS04120 0.41 -0.8
983,149 - ABZR88_RS04120 0.41 -0.1
983,308 - ABZR88_RS04120 0.57 +0.2
983,311 + ABZR88_RS04120 0.57 -0.1
983,577 - ABZR88_RS04120 0.84 +0.3

Or see this region's nucleotide sequence