Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS01250

Experiment: R2A motility; outer cut

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS01245 and ABZR88_RS01250 are separated by 102 nucleotidesABZR88_RS01250 and ABZR88_RS01255 are separated by 324 nucleotides ABZR88_RS01245: ABZR88_RS01245 - NUDIX hydrolase, at 291,079 to 291,639 _RS01245 ABZR88_RS01250: ABZR88_RS01250 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 291,742 to 292,476 _RS01250 ABZR88_RS01255: ABZR88_RS01255 - UMP kinase, at 292,801 to 293,505 _RS01255 Position (kb) 291 292 293Strain fitness (log2 ratio) -1 0 1at 291.252 kb on + strand, within ABZR88_RS01245at 291.369 kb on - strand, within ABZR88_RS01245at 291.557 kb on + strand, within ABZR88_RS01245at 291.769 kb on - strandat 291.822 kb on - strand, within ABZR88_RS01250at 291.905 kb on - strand, within ABZR88_RS01250at 291.998 kb on - strand, within ABZR88_RS01250at 292.189 kb on - strand, within ABZR88_RS01250at 292.276 kb on - strand, within ABZR88_RS01250at 292.368 kb on + strand, within ABZR88_RS01250at 292.375 kb on - strand, within ABZR88_RS01250at 292.608 kb on + strandat 292.608 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A motility; outer cut
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291,252 + ABZR88_RS01245 0.31 -0.7
291,369 - ABZR88_RS01245 0.52 +0.2
291,557 + ABZR88_RS01245 0.85 +0.4
291,769 - +0.5
291,822 - ABZR88_RS01250 0.11 -1.5
291,905 - ABZR88_RS01250 0.22 -1.7
291,998 - ABZR88_RS01250 0.35 +1.3
292,189 - ABZR88_RS01250 0.61 -1.6
292,276 - ABZR88_RS01250 0.73 +0.8
292,368 + ABZR88_RS01250 0.85 -0.3
292,375 - ABZR88_RS01250 0.86 -0.7
292,608 + -0.1
292,608 + -0.7

Or see this region's nucleotide sequence