Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS05515

Experiment: R2A 15C; 72 hours

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS05510 and ABZR88_RS05515 are separated by 48 nucleotidesABZR88_RS05515 and ABZR88_RS05520 are separated by 297 nucleotides ABZR88_RS05510: ABZR88_RS05510 - MFS transporter, at 1,326,978 to 1,328,186 _RS05510 ABZR88_RS05515: ABZR88_RS05515 - START domain-containing protein, at 1,328,235 to 1,328,882 _RS05515 ABZR88_RS05520: ABZR88_RS05520 - SDR family NAD(P)-dependent oxidoreductase, at 1,329,180 to 1,329,998 _RS05520 Position (kb) 1328 1329Strain fitness (log2 ratio) -1 0 1at 1327.251 kb on - strand, within ABZR88_RS05510at 1327.340 kb on - strand, within ABZR88_RS05510at 1327.355 kb on - strand, within ABZR88_RS05510at 1327.415 kb on + strand, within ABZR88_RS05510at 1327.416 kb on - strand, within ABZR88_RS05510at 1327.577 kb on + strand, within ABZR88_RS05510at 1327.577 kb on + strand, within ABZR88_RS05510at 1327.590 kb on - strand, within ABZR88_RS05510at 1327.601 kb on + strand, within ABZR88_RS05510at 1327.758 kb on - strand, within ABZR88_RS05510at 1327.838 kb on + strand, within ABZR88_RS05510at 1327.854 kb on - strand, within ABZR88_RS05510at 1327.854 kb on - strand, within ABZR88_RS05510at 1328.050 kb on + strand, within ABZR88_RS05510at 1328.347 kb on - strand, within ABZR88_RS05515at 1328.444 kb on + strand, within ABZR88_RS05515at 1328.483 kb on + strand, within ABZR88_RS05515at 1328.723 kb on - strand, within ABZR88_RS05515at 1328.945 kb on + strandat 1328.946 kb on - strandat 1328.946 kb on - strandat 1328.946 kb on - strandat 1328.946 kb on - strandat 1329.032 kb on + strandat 1329.244 kb on + strandat 1329.245 kb on - strandat 1329.577 kb on + strand, within ABZR88_RS05520at 1329.600 kb on - strand, within ABZR88_RS05520at 1329.621 kb on + strand, within ABZR88_RS05520at 1329.643 kb on + strand, within ABZR88_RS05520at 1329.698 kb on + strand, within ABZR88_RS05520

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A 15C; 72 hours
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1,327,251 - ABZR88_RS05510 0.23 +0.7
1,327,340 - ABZR88_RS05510 0.30 +1.6
1,327,355 - ABZR88_RS05510 0.31 +0.3
1,327,415 + ABZR88_RS05510 0.36 -0.0
1,327,416 - ABZR88_RS05510 0.36 -0.4
1,327,577 + ABZR88_RS05510 0.50 -0.2
1,327,577 + ABZR88_RS05510 0.50 +0.4
1,327,590 - ABZR88_RS05510 0.51 +0.3
1,327,601 + ABZR88_RS05510 0.52 +1.6
1,327,758 - ABZR88_RS05510 0.65 +0.0
1,327,838 + ABZR88_RS05510 0.71 +0.4
1,327,854 - ABZR88_RS05510 0.72 +1.0
1,327,854 - ABZR88_RS05510 0.72 -0.3
1,328,050 + ABZR88_RS05510 0.89 +0.4
1,328,347 - ABZR88_RS05515 0.17 +0.2
1,328,444 + ABZR88_RS05515 0.32 +0.1
1,328,483 + ABZR88_RS05515 0.38 +0.1
1,328,723 - ABZR88_RS05515 0.75 +0.1
1,328,945 + +0.3
1,328,946 - +0.0
1,328,946 - +0.5
1,328,946 - +0.2
1,328,946 - -0.3
1,329,032 + +0.1
1,329,244 + -0.6
1,329,245 - +1.0
1,329,577 + ABZR88_RS05520 0.48 -0.3
1,329,600 - ABZR88_RS05520 0.51 +1.0
1,329,621 + ABZR88_RS05520 0.54 -0.1
1,329,643 + ABZR88_RS05520 0.57 -0.6
1,329,698 + ABZR88_RS05520 0.63 -0.4

Or see this region's nucleotide sequence