Experiment: R2A 15C; 72 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS05510 and ABZR88_RS05515 are separated by 48 nucleotides ABZR88_RS05515 and ABZR88_RS05520 are separated by 297 nucleotides
ABZR88_RS05510: ABZR88_RS05510 - MFS transporter, at 1,326,978 to 1,328,186
_RS05510
ABZR88_RS05515: ABZR88_RS05515 - START domain-containing protein, at 1,328,235 to 1,328,882
_RS05515
ABZR88_RS05520: ABZR88_RS05520 - SDR family NAD(P)-dependent oxidoreductase, at 1,329,180 to 1,329,998
_RS05520
Position (kb)
1328
1329 Strain fitness (log2 ratio)
-1
0
1 at 1327.251 kb on - strand, within ABZR88_RS05510 at 1327.340 kb on - strand, within ABZR88_RS05510 at 1327.355 kb on - strand, within ABZR88_RS05510 at 1327.415 kb on + strand, within ABZR88_RS05510 at 1327.416 kb on - strand, within ABZR88_RS05510 at 1327.577 kb on + strand, within ABZR88_RS05510 at 1327.577 kb on + strand, within ABZR88_RS05510 at 1327.590 kb on - strand, within ABZR88_RS05510 at 1327.601 kb on + strand, within ABZR88_RS05510 at 1327.758 kb on - strand, within ABZR88_RS05510 at 1327.838 kb on + strand, within ABZR88_RS05510 at 1327.854 kb on - strand, within ABZR88_RS05510 at 1327.854 kb on - strand, within ABZR88_RS05510 at 1328.050 kb on + strand, within ABZR88_RS05510 at 1328.347 kb on - strand, within ABZR88_RS05515 at 1328.444 kb on + strand, within ABZR88_RS05515 at 1328.483 kb on + strand, within ABZR88_RS05515 at 1328.723 kb on - strand, within ABZR88_RS05515 at 1328.945 kb on + strand at 1328.946 kb on - strand at 1328.946 kb on - strand at 1328.946 kb on - strand at 1328.946 kb on - strand at 1329.032 kb on + strand at 1329.244 kb on + strand at 1329.245 kb on - strand at 1329.577 kb on + strand, within ABZR88_RS05520 at 1329.600 kb on - strand, within ABZR88_RS05520 at 1329.621 kb on + strand, within ABZR88_RS05520 at 1329.643 kb on + strand, within ABZR88_RS05520 at 1329.698 kb on + strand, within ABZR88_RS05520
Per-strain Table
Position Strand Gene LocusTag Fraction R2A 15C; 72 hours remove 1,327,251 - ABZR88_RS05510 0.23 +0.7 1,327,340 - ABZR88_RS05510 0.30 +1.6 1,327,355 - ABZR88_RS05510 0.31 +0.3 1,327,415 + ABZR88_RS05510 0.36 -0.0 1,327,416 - ABZR88_RS05510 0.36 -0.4 1,327,577 + ABZR88_RS05510 0.50 -0.2 1,327,577 + ABZR88_RS05510 0.50 +0.4 1,327,590 - ABZR88_RS05510 0.51 +0.3 1,327,601 + ABZR88_RS05510 0.52 +1.6 1,327,758 - ABZR88_RS05510 0.65 +0.0 1,327,838 + ABZR88_RS05510 0.71 +0.4 1,327,854 - ABZR88_RS05510 0.72 +1.0 1,327,854 - ABZR88_RS05510 0.72 -0.3 1,328,050 + ABZR88_RS05510 0.89 +0.4 1,328,347 - ABZR88_RS05515 0.17 +0.2 1,328,444 + ABZR88_RS05515 0.32 +0.1 1,328,483 + ABZR88_RS05515 0.38 +0.1 1,328,723 - ABZR88_RS05515 0.75 +0.1 1,328,945 + +0.3 1,328,946 - +0.0 1,328,946 - +0.5 1,328,946 - +0.2 1,328,946 - -0.3 1,329,032 + +0.1 1,329,244 + -0.6 1,329,245 - +1.0 1,329,577 + ABZR88_RS05520 0.48 -0.3 1,329,600 - ABZR88_RS05520 0.51 +1.0 1,329,621 + ABZR88_RS05520 0.54 -0.1 1,329,643 + ABZR88_RS05520 0.57 -0.6 1,329,698 + ABZR88_RS05520 0.63 -0.4
Or see this region's nucleotide sequence