Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS21355

Experiment: R2A motility; outer cut

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS21350 and ABZR88_RS21355 are separated by 174 nucleotidesABZR88_RS21355 and ABZR88_RS21360 overlap by 1 nucleotidesABZR88_RS21360 and ABZR88_RS21365 are separated by 21 nucleotidesABZR88_RS21365 and ABZR88_RS21370 overlap by 4 nucleotides ABZR88_RS21350: ABZR88_RS21350 - hypothetical protein, at 5,139,244 to 5,141,445 _RS21350 ABZR88_RS21355: ABZR88_RS21355 - manganese catalase family protein, at 5,141,620 to 5,142,561 _RS21355 ABZR88_RS21360: ABZR88_RS21360 - hypothetical protein, at 5,142,561 to 5,142,722 _RS21360 ABZR88_RS21365: ABZR88_RS21365 - DUF1810 domain-containing protein, at 5,142,744 to 5,143,175 _RS21365 ABZR88_RS21370: ABZR88_RS21370 - hypothetical protein, at 5,143,172 to 5,143,507 _RS21370 Position (kb) 5141 5142 5143Strain fitness (log2 ratio) -1 0 1at 5140.702 kb on + strand, within ABZR88_RS21350at 5140.989 kb on - strand, within ABZR88_RS21350at 5141.404 kb on + strandat 5141.446 kb on - strandat 5141.475 kb on - strandat 5141.642 kb on + strandat 5141.794 kb on - strand, within ABZR88_RS21355at 5141.794 kb on - strand, within ABZR88_RS21355at 5141.805 kb on + strand, within ABZR88_RS21355at 5142.050 kb on - strand, within ABZR88_RS21355at 5142.052 kb on - strand, within ABZR88_RS21355at 5142.157 kb on + strand, within ABZR88_RS21355at 5142.295 kb on + strand, within ABZR88_RS21355at 5142.296 kb on - strand, within ABZR88_RS21355at 5142.297 kb on + strand, within ABZR88_RS21355at 5142.370 kb on + strand, within ABZR88_RS21355at 5142.422 kb on + strand, within ABZR88_RS21355at 5142.541 kb on + strandat 5142.850 kb on - strand, within ABZR88_RS21365at 5142.850 kb on - strand, within ABZR88_RS21365at 5142.852 kb on - strand, within ABZR88_RS21365at 5142.978 kb on - strand, within ABZR88_RS21365at 5142.988 kb on + strand, within ABZR88_RS21365at 5142.989 kb on - strand, within ABZR88_RS21365at 5143.243 kb on - strand, within ABZR88_RS21370at 5143.468 kb on + strand, within ABZR88_RS21370at 5143.508 kb on - strandat 5143.508 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A motility; outer cut
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5,140,702 + ABZR88_RS21350 0.66 -0.9
5,140,989 - ABZR88_RS21350 0.79 -0.5
5,141,404 + +0.4
5,141,446 - -0.3
5,141,475 - -0.2
5,141,642 + -0.2
5,141,794 - ABZR88_RS21355 0.18 +0.4
5,141,794 - ABZR88_RS21355 0.18 -0.5
5,141,805 + ABZR88_RS21355 0.20 +0.4
5,142,050 - ABZR88_RS21355 0.46 -1.2
5,142,052 - ABZR88_RS21355 0.46 -0.1
5,142,157 + ABZR88_RS21355 0.57 -0.1
5,142,295 + ABZR88_RS21355 0.72 -0.9
5,142,296 - ABZR88_RS21355 0.72 -1.0
5,142,297 + ABZR88_RS21355 0.72 -0.9
5,142,370 + ABZR88_RS21355 0.80 -0.4
5,142,422 + ABZR88_RS21355 0.85 -0.4
5,142,541 + -0.1
5,142,850 - ABZR88_RS21365 0.25 -0.6
5,142,850 - ABZR88_RS21365 0.25 -0.1
5,142,852 - ABZR88_RS21365 0.25 +0.9
5,142,978 - ABZR88_RS21365 0.54 -0.8
5,142,988 + ABZR88_RS21365 0.56 +0.7
5,142,989 - ABZR88_RS21365 0.57 -1.0
5,143,243 - ABZR88_RS21370 0.21 -0.4
5,143,468 + ABZR88_RS21370 0.88 +0.8
5,143,508 - -0.3
5,143,508 - +0.1

Or see this region's nucleotide sequence