Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS19630

Experiment: R2A 30C; 144 hours

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS19625 and ABZR88_RS19630 are separated by 105 nucleotidesABZR88_RS19630 and ABZR88_RS19635 are separated by 27 nucleotides ABZR88_RS19625: ABZR88_RS19625 - hypothetical protein, at 4,767,796 to 4,768,806 _RS19625 ABZR88_RS19630: ABZR88_RS19630 - outer membrane beta-barrel protein, at 4,768,912 to 4,770,063 _RS19630 ABZR88_RS19635: ABZR88_RS19635 - hypothetical protein, at 4,770,091 to 4,772,565 _RS19635 Position (kb) 4768 4769 4770 4771Strain fitness (log2 ratio) -3 -2 -1 0 1at 4768.003 kb on + strand, within ABZR88_RS19625at 4768.027 kb on + strand, within ABZR88_RS19625at 4768.028 kb on - strand, within ABZR88_RS19625at 4768.110 kb on + strand, within ABZR88_RS19625at 4768.111 kb on - strand, within ABZR88_RS19625at 4768.111 kb on - strand, within ABZR88_RS19625at 4768.111 kb on - strand, within ABZR88_RS19625at 4768.300 kb on - strand, within ABZR88_RS19625at 4768.300 kb on - strand, within ABZR88_RS19625at 4768.314 kb on + strand, within ABZR88_RS19625at 4768.314 kb on + strand, within ABZR88_RS19625at 4768.331 kb on + strand, within ABZR88_RS19625at 4768.531 kb on + strand, within ABZR88_RS19625at 4768.616 kb on + strand, within ABZR88_RS19625at 4768.710 kb on + strandat 4768.805 kb on - strandat 4768.891 kb on + strandat 4768.939 kb on - strandat 4768.986 kb on + strandat 4768.986 kb on + strandat 4769.296 kb on + strand, within ABZR88_RS19630at 4769.296 kb on + strand, within ABZR88_RS19630at 4769.395 kb on - strand, within ABZR88_RS19630at 4769.489 kb on - strand, within ABZR88_RS19630at 4769.516 kb on - strand, within ABZR88_RS19630at 4769.562 kb on + strand, within ABZR88_RS19630at 4769.835 kb on + strand, within ABZR88_RS19630at 4770.177 kb on + strandat 4770.378 kb on - strand, within ABZR88_RS19635at 4770.378 kb on - strand, within ABZR88_RS19635at 4770.515 kb on - strand, within ABZR88_RS19635at 4770.561 kb on + strand, within ABZR88_RS19635at 4770.576 kb on - strand, within ABZR88_RS19635at 4770.697 kb on - strand, within ABZR88_RS19635at 4770.800 kb on - strand, within ABZR88_RS19635at 4770.893 kb on + strand, within ABZR88_RS19635

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A 30C; 144 hours
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4,768,003 + ABZR88_RS19625 0.20 -0.4
4,768,027 + ABZR88_RS19625 0.23 -0.3
4,768,028 - ABZR88_RS19625 0.23 +0.0
4,768,110 + ABZR88_RS19625 0.31 +0.1
4,768,111 - ABZR88_RS19625 0.31 +0.6
4,768,111 - ABZR88_RS19625 0.31 -0.1
4,768,111 - ABZR88_RS19625 0.31 +1.1
4,768,300 - ABZR88_RS19625 0.50 -0.1
4,768,300 - ABZR88_RS19625 0.50 +0.3
4,768,314 + ABZR88_RS19625 0.51 +0.3
4,768,314 + ABZR88_RS19625 0.51 +0.1
4,768,331 + ABZR88_RS19625 0.53 -0.5
4,768,531 + ABZR88_RS19625 0.73 -0.2
4,768,616 + ABZR88_RS19625 0.81 -0.6
4,768,710 + +0.3
4,768,805 - -0.5
4,768,891 + +0.0
4,768,939 - -0.2
4,768,986 + +0.5
4,768,986 + -1.0
4,769,296 + ABZR88_RS19630 0.33 +1.1
4,769,296 + ABZR88_RS19630 0.33 +0.3
4,769,395 - ABZR88_RS19630 0.42 -0.2
4,769,489 - ABZR88_RS19630 0.50 -2.8
4,769,516 - ABZR88_RS19630 0.52 -0.1
4,769,562 + ABZR88_RS19630 0.56 +0.1
4,769,835 + ABZR88_RS19630 0.80 -0.4
4,770,177 + -0.9
4,770,378 - ABZR88_RS19635 0.12 -0.2
4,770,378 - ABZR88_RS19635 0.12 +0.1
4,770,515 - ABZR88_RS19635 0.17 -0.3
4,770,561 + ABZR88_RS19635 0.19 -0.6
4,770,576 - ABZR88_RS19635 0.20 -0.7
4,770,697 - ABZR88_RS19635 0.24 -0.0
4,770,800 - ABZR88_RS19635 0.29 +0.1
4,770,893 + ABZR88_RS19635 0.32 -1.7

Or see this region's nucleotide sequence